Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SOX1O00570 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SOX1O00570 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SOX1O00570 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SOX1O00570 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SOX1O00570 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
SOX1O00570 PARP4P1-201ENST00000435945 2337 ntBASIC6.37□□□□□ -1.39
SOX1O00570 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SOX1O00570 PARN-201ENST00000341484 2100 ntTSL 2 BASIC6.37□□□□□ -1.39
SOX1O00570 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SOX1O00570 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SOX1O00570 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
SOX1O00570 RNU4-79P-201ENST00000362764 141 ntBASIC6.37□□□□□ -1.39
SOX1O00570 SNORA62-201ENST00000365493 153 ntBASIC6.37□□□□□ -1.39
SOX1O00570 RNU6ATAC18P-201ENST00000408413 101 ntBASIC6.37□□□□□ -1.39
SOX1O00570 RN7SKP29-201ENST00000410957 272 ntBASIC6.37□□□□□ -1.39
SOX1O00570 HMGB3P20-201ENST00000417997 600 ntBASIC6.37□□□□□ -1.39
SOX1O00570 AL035410.1-201ENST00000427409 427 ntBASIC6.37□□□□□ -1.39
SOX1O00570 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC6.37□□□□□ -1.39
SOX1O00570 RPL7P4-203ENST00000430239 730 ntBASIC6.37□□□□□ -1.39
SOX1O00570 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
SOX1O00570 AC109583.1-201ENST00000432156 268 ntBASIC6.37□□□□□ -1.39
SOX1O00570 CYCSP6-201ENST00000434498 302 ntBASIC6.37□□□□□ -1.39
SOX1O00570 AC092809.1-201ENST00000441469 474 ntBASIC6.37□□□□□ -1.39
SOX1O00570 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.37□□□□□ -1.39
SOX1O00570 AL035090.1-201ENST00000454835 332 ntBASIC6.37□□□□□ -1.39
SOX1O00570 NF1P3-201ENST00000457709 450 ntBASIC6.37□□□□□ -1.39
SOX1O00570 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC6.37□□□□□ -1.39
SOX1O00570 RN7SL561P-201ENST00000488553 281 ntBASIC6.37□□□□□ -1.39
SOX1O00570 AC007182.2-201ENST00000489251 402 ntBASIC6.37□□□□□ -1.39
SOX1O00570 RPL35P6-201ENST00000490024 372 ntBASIC6.37□□□□□ -1.39
SOX1O00570 AC090638.1-201ENST00000498296 909 ntBASIC6.37□□□□□ -1.39
SOX1O00570 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC6.37□□□□□ -1.39
SOX1O00570 NRBF2P4-201ENST00000520874 850 ntBASIC6.37□□□□□ -1.39
SOX1O00570 OR5D2P-201ENST00000524390 911 ntBASIC6.37□□□□□ -1.39
SOX1O00570 AP003034.1-201ENST00000534621 422 ntBASIC6.37□□□□□ -1.39
SOX1O00570 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC6.37□□□□□ -1.39
SOX1O00570 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC6.37□□□□□ -1.39
SOX1O00570 MIR3671-201ENST00000580455 88 ntBASIC6.37□□□□□ -1.39
SOX1O00570 AC209154.1-201ENST00000582156 337 ntBASIC6.37□□□□□ -1.39
SOX1O00570 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC6.37□□□□□ -1.39
SOX1O00570 NRBF2P1-201ENST00000587407 859 ntBASIC6.37□□□□□ -1.39
SOX1O00570 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.37□□□□□ -1.39
SOX1O00570 BNIP3P23-201ENST00000599655 511 ntBASIC6.37□□□□□ -1.39
SOX1O00570 AL035413.2-201ENST00000604801 525 ntBASIC6.37□□□□□ -1.39
SOX1O00570 AC090525.3-201ENST00000605601 189 ntBASIC6.37□□□□□ -1.39
SOX1O00570 AL050343.2-201ENST00000607338 280 ntBASIC6.37□□□□□ -1.39
SOX1O00570 Z95327.3-201ENST00000610385 572 ntBASIC6.37□□□□□ -1.39
SOX1O00570 AP002799.1-201ENST00000623552 423 ntBASIC6.37□□□□□ -1.39
SOX1O00570 AC005618.4-201ENST00000625053 554 ntBASIC6.37□□□□□ -1.39
SOX1O00570 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC6.37□□□□□ -1.39
SOX1O00570 AC010329.1-201ENST00000593903 8328 ntBASIC6.37□□□□□ -1.39
SOX1O00570 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
SOX1O00570 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SOX1O00570 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.37□□□□□ -1.39
SOX1O00570 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SOX1O00570 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC6.37□□□□□ -1.39
SOX1O00570 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC6.37□□□□□ -1.39
SOX1O00570 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.37□□□□□ -1.39
SOX1O00570 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SOX1O00570 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.37□□□□□ -1.39
SOX1O00570 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC6.37□□□□□ -1.39
SOX1O00570 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SOX1O00570 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
SOX1O00570 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SOX1O00570 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SOX1O00570 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
SOX1O00570 RMST-210ENST00000640149 2844 ntTSL 5 BASIC6.36□□□□□ -1.39
SOX1O00570 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SOX1O00570 AC007485.2-201ENST00000623493 1667 ntBASIC6.36□□□□□ -1.39
SOX1O00570 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SOX1O00570 UGT2B26P-201ENST00000508672 1613 ntBASIC6.36□□□□□ -1.39
SOX1O00570 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
SOX1O00570 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC6.36□□□□□ -1.39
SOX1O00570 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC6.36□□□□□ -1.39
SOX1O00570 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC6.36□□□□□ -1.39
SOX1O00570 AL161912.4-201ENST00000623889 2468 ntBASIC6.36□□□□□ -1.39
SOX1O00570 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC6.36□□□□□ -1.39
SOX1O00570 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
SOX1O00570 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.36□□□□□ -1.39
SOX1O00570 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SOX1O00570 U3.2-201ENST00000362981 210 ntBASIC6.36□□□□□ -1.39
SOX1O00570 RNU1-32P-201ENST00000363937 159 ntBASIC6.36□□□□□ -1.39
SOX1O00570 SNORA62.2-201ENST00000364672 152 ntBASIC6.36□□□□□ -1.39
SOX1O00570 RNY4P34-201ENST00000364779 95 ntBASIC6.36□□□□□ -1.39
SOX1O00570 RNU6-332P-201ENST00000391193 108 ntBASIC6.36□□□□□ -1.39
SOX1O00570 AL049693.1-201ENST00000402760 611 ntBASIC6.36□□□□□ -1.39
SOX1O00570 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SOX1O00570 OR2W4P-201ENST00000406496 926 ntBASIC6.36□□□□□ -1.39
SOX1O00570 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC6.36□□□□□ -1.39
SOX1O00570 AL354751.2-201ENST00000415471 210 ntBASIC6.36□□□□□ -1.39
SOX1O00570 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SOX1O00570 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC6.36□□□□□ -1.39
SOX1O00570 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC6.36□□□□□ -1.39
SOX1O00570 NIPA2P5-201ENST00000452282 464 ntBASIC6.36□□□□□ -1.39
SOX1O00570 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC6.36□□□□□ -1.39
SOX1O00570 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC6.36□□□□□ -1.39
SOX1O00570 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.36□□□□□ -1.39
SOX1O00570 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC6.36□□□□□ -1.39
SOX1O00570 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms