Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SDCBPO00560 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
SDCBPO00560 OR11H4-201ENST00000315409 1082 ntBASIC3.34□□□□□ -1.87
SDCBPO00560 RNU1-32P-201ENST00000363937 159 ntBASIC3.34□□□□□ -1.87
SDCBPO00560 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC3.34□□□□□ -1.87
SDCBPO00560 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
SDCBPO00560 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SDCBPO00560 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
SDCBPO00560 RNU11-4P-201ENST00000391149 133 ntBASIC3.34□□□□□ -1.87
SDCBPO00560 OR6C69P-201ENST00000394268 893 ntBASIC3.34□□□□□ -1.87
SDCBPO00560 HSPE1P12-201ENST00000412576 301 ntBASIC3.34□□□□□ -1.87
SDCBPO00560 OR5BE1P-201ENST00000425977 939 ntBASIC3.34□□□□□ -1.87
SDCBPO00560 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC3.34□□□□□ -1.87
SDCBPO00560 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SDCBPO00560 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SDCBPO00560 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.34□□□□□ -1.87
SDCBPO00560 AC239809.1-201ENST00000450470 217 ntBASIC3.34□□□□□ -1.87
SDCBPO00560 RN7SL93P-201ENST00000463035 293 ntBASIC3.34□□□□□ -1.87
SDCBPO00560 RPL7P24-201ENST00000493052 752 ntBASIC3.34□□□□□ -1.87
SDCBPO00560 RPS27AP13-201ENST00000498403 237 ntBASIC3.34□□□□□ -1.87
SDCBPO00560 AC004069.2-201ENST00000505438 1114 ntBASIC3.34□□□□□ -1.87
SDCBPO00560 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.34□□□□□ -1.87
SDCBPO00560 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.34□□□□□ -1.87
SDCBPO00560 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC3.34□□□□□ -1.87
SDCBPO00560 AC034205.1-201ENST00000520621 638 ntBASIC3.34□□□□□ -1.87
SDCBPO00560 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.34□□□□□ -1.87
SDCBPO00560 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.34□□□□□ -1.87
SDCBPO00560 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.34□□□□□ -1.87
SDCBPO00560 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.34□□□□□ -1.87
SDCBPO00560 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.34□□□□□ -1.87
SDCBPO00560 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.34□□□□□ -1.87
SDCBPO00560 AC023575.1-201ENST00000580510 358 ntBASIC3.34□□□□□ -1.87
SDCBPO00560 AC011477.5-201ENST00000586571 259 ntBASIC3.34□□□□□ -1.87
SDCBPO00560 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.34□□□□□ -1.87
SDCBPO00560 EIF1P6-201ENST00000600054 334 ntBASIC3.34□□□□□ -1.87
SDCBPO00560 BRDTP1-201ENST00000605735 677 ntBASIC3.34□□□□□ -1.87
SDCBPO00560 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.34□□□□□ -1.87
SDCBPO00560 AC010435.1-201ENST00000623353 1177 ntBASIC3.34□□□□□ -1.87
SDCBPO00560 OR5BE1P-202ENST00000641168 1176 ntBASIC3.34□□□□□ -1.87
SDCBPO00560 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
SDCBPO00560 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SDCBPO00560 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.34□□□□□ -1.87
SDCBPO00560 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.34□□□□□ -1.88
SDCBPO00560 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.34□□□□□ -1.88
SDCBPO00560 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.88
SDCBPO00560 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.34□□□□□ -1.88
SDCBPO00560 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
SDCBPO00560 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC3.33□□□□□ -1.88
SDCBPO00560 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
SDCBPO00560 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SDCBPO00560 LINC00561-201ENST00000565815 2738 ntBASIC3.33□□□□□ -1.88
SDCBPO00560 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SDCBPO00560 RNU1-18P-201ENST00000363062 164 ntBASIC3.33□□□□□ -1.88
SDCBPO00560 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.33□□□□□ -1.88
SDCBPO00560 RPL5P19-201ENST00000404228 893 ntBASIC3.33□□□□□ -1.88
SDCBPO00560 AMD1P2-201ENST00000412936 992 ntBASIC3.33□□□□□ -1.88
SDCBPO00560 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.33□□□□□ -1.88
SDCBPO00560 AC016769.2-201ENST00000414815 475 ntBASIC3.33□□□□□ -1.88
SDCBPO00560 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.33□□□□□ -1.88
SDCBPO00560 CYP4F29P-201ENST00000420685 446 ntBASIC3.33□□□□□ -1.88
SDCBPO00560 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC3.33□□□□□ -1.88
SDCBPO00560 AP000936.3-201ENST00000438127 255 ntBASIC3.33□□□□□ -1.88
SDCBPO00560 HMGB1P37-201ENST00000439613 609 ntBASIC3.33□□□□□ -1.88
SDCBPO00560 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC3.33□□□□□ -1.88
SDCBPO00560 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.33□□□□□ -1.88
SDCBPO00560 NUTF2P3-201ENST00000448540 384 ntBASIC3.33□□□□□ -1.88
SDCBPO00560 FABP3P2-201ENST00000453169 399 ntBASIC3.33□□□□□ -1.88
SDCBPO00560 PRELID3BP7-201ENST00000503606 469 ntBASIC3.33□□□□□ -1.88
SDCBPO00560 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC3.33□□□□□ -1.88
SDCBPO00560 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SDCBPO00560 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SDCBPO00560 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.33□□□□□ -1.88
SDCBPO00560 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.33□□□□□ -1.88
SDCBPO00560 AC092851.1-201ENST00000535964 478 ntBASIC3.33□□□□□ -1.88
SDCBPO00560 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SDCBPO00560 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC3.33□□□□□ -1.88
SDCBPO00560 AC141257.3-201ENST00000572906 215 ntBASIC3.33□□□□□ -1.88
SDCBPO00560 AC099489.2-201ENST00000574976 260 ntBASIC3.33□□□□□ -1.88
SDCBPO00560 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.33□□□□□ -1.88
SDCBPO00560 AC015908.5-201ENST00000623289 343 ntBASIC3.33□□□□□ -1.88
SDCBPO00560 AP002967.1-201ENST00000624203 539 ntBASIC3.33□□□□□ -1.88
SDCBPO00560 AC010608.2-201ENST00000624830 470 ntBASIC3.33□□□□□ -1.88
SDCBPO00560 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.33□□□□□ -1.88
SDCBPO00560 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.33□□□□□ -1.88
SDCBPO00560 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
SDCBPO00560 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SDCBPO00560 AL133412.1-201ENST00000380194 2992 ntBASIC3.33□□□□□ -1.88
SDCBPO00560 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SDCBPO00560 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SDCBPO00560 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
SDCBPO00560 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SDCBPO00560 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SDCBPO00560 AC008725.1-201ENST00000605123 2263 ntBASIC3.32□□□□□ -1.88
SDCBPO00560 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.32□□□□□ -1.88
SDCBPO00560 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SDCBPO00560 ATP5F1P4-201ENST00000397288 746 ntBASIC3.32□□□□□ -1.88
SDCBPO00560 RPL7AP73-201ENST00000413490 353 ntBASIC3.32□□□□□ -1.88
SDCBPO00560 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.32□□□□□ -1.88
SDCBPO00560 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.32□□□□□ -1.88
SDCBPO00560 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms