Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 CEACAMP9-201ENST00000442990 513 ntBASIC4.71□□□□□ -1.66
O00370 DDX39BP2-208ENST00000453923 258 ntBASIC4.71□□□□□ -1.66
O00370 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.71□□□□□ -1.66
O00370 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.71□□□□□ -1.66
O00370 RN7SL459P-201ENST00000481078 302 ntBASIC4.71□□□□□ -1.66
O00370 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.71□□□□□ -1.66
O00370 RNA5SP497-201ENST00000516081 97 ntBASIC4.71□□□□□ -1.66
O00370 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.71□□□□□ -1.66
O00370 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.71□□□□□ -1.66
O00370 HAUS1P3-201ENST00000523909 662 ntBASIC4.71□□□□□ -1.66
O00370 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
O00370 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.71□□□□□ -1.66
O00370 AC008083.2-201ENST00000546707 476 ntBASIC4.71□□□□□ -1.66
O00370 CR383656.6-201ENST00000550518 394 ntBASIC4.71□□□□□ -1.66
O00370 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.71□□□□□ -1.66
O00370 CR383656.14-201ENST00000551951 406 ntBASIC4.71□□□□□ -1.66
O00370 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.71□□□□□ -1.66
O00370 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.71□□□□□ -1.66
O00370 AC008638.3-201ENST00000603341 463 ntBASIC4.71□□□□□ -1.66
O00370 AC139769.3-201ENST00000618383 175 ntBASIC4.71□□□□□ -1.66
O00370 AC006249.1-201ENST00000621223 471 ntBASIC4.71□□□□□ -1.66
O00370 AC097372.4-201ENST00000625025 466 ntBASIC4.71□□□□□ -1.66
O00370 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.71□□□□□ -1.66
O00370 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
O00370 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.71□□□□□ -1.66
O00370 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.71□□□□□ -1.66
O00370 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.71□□□□□ -1.66
O00370 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.71□□□□□ -1.66
O00370 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
O00370 AL592182.3-201ENST00000642132 3304 ntBASIC4.7□□□□□ -1.66
O00370 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
O00370 AC008033.1-201ENST00000216407 1162 ntBASIC4.7□□□□□ -1.66
O00370 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
O00370 RNA5SP307-201ENST00000362863 116 ntBASIC4.7□□□□□ -1.66
O00370 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
O00370 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
O00370 AL356387.2-201ENST00000422272 243 ntBASIC4.7□□□□□ -1.66
O00370 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.7□□□□□ -1.66
O00370 NIPA2P1-201ENST00000426223 976 ntBASIC4.7□□□□□ -1.66
O00370 AC073069.1-201ENST00000428657 441 ntBASIC4.7□□□□□ -1.66
O00370 CNOT7P1-201ENST00000429006 852 ntBASIC4.7□□□□□ -1.66
O00370 UBE2V1P3-201ENST00000439651 417 ntBASIC4.7□□□□□ -1.66
O00370 AL353748.1-201ENST00000440753 474 ntBASIC4.7□□□□□ -1.66
O00370 AC114495.1-201ENST00000441274 436 ntBASIC4.7□□□□□ -1.66
O00370 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.7□□□□□ -1.66
O00370 RPL7P33-201ENST00000444159 742 ntBASIC4.7□□□□□ -1.66
O00370 RPS27AP15-201ENST00000447672 466 ntBASIC4.7□□□□□ -1.66
O00370 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.7□□□□□ -1.66
O00370 DHFRP3-201ENST00000455595 559 ntBASIC4.7□□□□□ -1.66
O00370 MTND2P28-201ENST00000457540 1044 ntBASIC4.7□□□□□ -1.66
O00370 AC092905.1-201ENST00000467527 949 ntBASIC4.7□□□□□ -1.66
O00370 SUMO1P1-201ENST00000497904 306 ntBASIC4.7□□□□□ -1.66
O00370 AC006499.6-201ENST00000511169 607 ntBASIC4.7□□□□□ -1.66
O00370 AC015795.1-201ENST00000513669 327 ntBASIC4.7□□□□□ -1.66
O00370 AC092593.2-201ENST00000513866 913 ntBASIC4.7□□□□□ -1.66
O00370 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
O00370 IGLV3-26-201ENST00000520756 302 ntBASIC4.7□□□□□ -1.66
O00370 AC090819.1-201ENST00000523800 1111 ntBASIC4.7□□□□□ -1.66
O00370 AC113192.3-201ENST00000529152 742 ntBASIC4.7□□□□□ -1.66
O00370 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.7□□□□□ -1.66
O00370 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.7□□□□□ -1.66
O00370 AC021483.2-201ENST00000567415 758 ntBASIC4.7□□□□□ -1.66
O00370 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.7□□□□□ -1.66
O00370 MIR5096-201ENST00000583713 70 ntBASIC4.7□□□□□ -1.66
O00370 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.7□□□□□ -1.66
O00370 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
O00370 AL049844.2-201ENST00000604280 628 ntBASIC4.7□□□□□ -1.66
O00370 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.7□□□□□ -1.66
O00370 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.7□□□□□ -1.66
O00370 AC245389.2-201ENST00000616023 576 ntBASIC4.7□□□□□ -1.66
O00370 AC242843.1-201ENST00000618702 573 ntBASIC4.7□□□□□ -1.66
O00370 AL023881.1-201ENST00000621088 301 ntBASIC4.7□□□□□ -1.66
O00370 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
O00370 AC106858.1-201ENST00000637497 429 ntBASIC4.7□□□□□ -1.66
O00370 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
O00370 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.7□□□□□ -1.66
O00370 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.7□□□□□ -1.66
O00370 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
O00370 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.7□□□□□ -1.66
O00370 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
O00370 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
O00370 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
O00370 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.69□□□□□ -1.66
O00370 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.69□□□□□ -1.66
O00370 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.69□□□□□ -1.66
O00370 RNU1-44P-201ENST00000384453 163 ntBASIC4.69□□□□□ -1.66
O00370 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
O00370 ELOCP19-201ENST00000411919 318 ntBASIC4.69□□□□□ -1.66
O00370 SEC63P1-201ENST00000425785 1258 ntBASIC4.69□□□□□ -1.66
O00370 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.69□□□□□ -1.66
O00370 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.69□□□□□ -1.66
O00370 ZNF736P11Y-201ENST00000442535 1213 ntBASIC4.69□□□□□ -1.66
O00370 ZNF736P12Y-201ENST00000443152 1243 ntBASIC4.69□□□□□ -1.66
O00370 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC4.69□□□□□ -1.66
O00370 RPL23AP23-201ENST00000452590 471 ntBASIC4.69□□□□□ -1.66
O00370 ZNF736P4Y-201ENST00000454995 1243 ntBASIC4.69□□□□□ -1.66
O00370 snoU13.1-201ENST00000459157 104 ntBASIC4.69□□□□□ -1.66
O00370 RPL23AP12-201ENST00000467573 473 ntBASIC4.69□□□□□ -1.66
O00370 RN7SL860P-201ENST00000473738 223 ntBASIC4.69□□□□□ -1.66
O00370 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms