Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 RNA5SP234-201ENST00000363916 119 ntBASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 RN7SKP280-201ENST00000364196 304 ntBASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 RNA5SP175-201ENST00000364275 119 ntBASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 U3.30-201ENST00000391308 210 ntBASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 AL034403.1-201ENST00000399414 885 ntBASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 OR1F12-201ENST00000402365 945 ntBASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 AL391417.1-201ENST00000404100 426 ntBASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 AP002530.1-201ENST00000405705 684 ntBASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 RPL23AP47-201ENST00000408017 460 ntBASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 PGBD4P8-201ENST00000412993 562 ntBASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 FAR2P2-201ENST00000413041 594 ntBASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 AC098592.2-201ENST00000413158 265 ntBASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 NAP1L1P2-201ENST00000414182 1089 ntBASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 AC048351.1-201ENST00000420064 602 ntBASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 ARAFP1-201ENST00000422172 605 ntBASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 TEX41-204ENST00000423031 491 ntTSL 4 BASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 NPM1P34-201ENST00000428821 893 ntBASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 ELOCP6-201ENST00000429066 328 ntBASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 AL590103.1-201ENST00000434488 307 ntBASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 UBE2V1P3-201ENST00000439651 417 ntBASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 AL390119.1-201ENST00000440329 312 ntBASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 HSPE1P28-201ENST00000443139 211 ntBASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 MTCYBP21-201ENST00000443300 1113 ntBASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 PHBP16-201ENST00000446318 950 ntBASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 ELOCP12-201ENST00000458706 328 ntBASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 RPL23AP56-201ENST00000460778 453 ntBASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 AC007688.1-201ENST00000475592 759 ntBASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 RN7SL283P-201ENST00000489055 303 ntBASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 AC021006.1-201ENST00000489849 553 ntBASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 RNA5SP271-201ENST00000516700 88 ntBASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 CARD16-203ENST00000525374 503 ntTSL 3 BASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 OR7E10P-201ENST00000526420 991 ntBASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 AL163153.1-201ENST00000554223 283 ntBASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 AL845552.1-201ENST00000556820 323 ntBASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 MIR3187-201ENST00000583431 70 ntBASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 AC005746.2-201ENST00000585765 470 ntTSL 5 BASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 SUGT1P3-202ENST00000604259 383 ntBASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 AL139041.1-201ENST00000605480 610 ntBASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 MIR6885-201ENST00000612241 66 ntBASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 AC090527.3-201ENST00000619041 548 ntBASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 AC006065.5-201ENST00000623427 349 ntBASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 AL691477.1-201ENST00000624398 162 ntBASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 AC091905.1-201ENST00000624400 311 ntBASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 AP003072.4-201ENST00000624580 310 ntBASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 FP325313.1-201ENST00000638228 703 ntBASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 CASC19-264ENST00000641912 1184 ntBASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 NCLP2-201ENST00000416078 1462 ntBASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 API5-210ENST00000534600 1760 ntTSL 5 BASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 PTER-201ENST00000298942 3448 ntTSL 5 BASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 AC110774.1-201ENST00000623567 2018 ntBASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 AC009487.2-201ENST00000420969 6821 ntBASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 RNU1-75P-201ENST00000347264 129 ntBASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 GSTA12P-201ENST00000402398 508 ntBASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 SSR1P1-201ENST00000407630 814 ntBASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 RNU6ATAC21P-201ENST00000408656 126 ntBASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 AC009965.2-201ENST00000425328 970 ntBASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 RPEP2-201ENST00000432149 701 ntBASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 CYCSP12-201ENST00000437729 300 ntBASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 HIGD1AP11-201ENST00000438361 280 ntBASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 NPM1P49-201ENST00000448027 714 ntBASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 RPS29P19-201ENST00000479709 171 ntBASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 AC005726.1-201ENST00000494679 427 ntBASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC2.16□□□□□ -2.06
CHKB-CPT1BH3BT56 MTND4LP22-201ENST00000508209 276 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms