Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.35□□□□□ -1.87
TMEM235A6NFC5 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC3.35□□□□□ -1.87
TMEM235A6NFC5 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TMEM235A6NFC5 CR381670.1-201ENST00000624291 1693 ntBASIC3.35□□□□□ -1.87
TMEM235A6NFC5 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TMEM235A6NFC5 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TMEM235A6NFC5 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
TMEM235A6NFC5 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TMEM235A6NFC5 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC3.34□□□□□ -1.87
TMEM235A6NFC5 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TMEM235A6NFC5 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TMEM235A6NFC5 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TMEM235A6NFC5 RN7SKP44-201ENST00000363602 316 ntBASIC3.34□□□□□ -1.87
TMEM235A6NFC5 HLFP1-201ENST00000402375 499 ntBASIC3.34□□□□□ -1.87
TMEM235A6NFC5 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TMEM235A6NFC5 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC3.34□□□□□ -1.87
TMEM235A6NFC5 AL590762.4-201ENST00000425885 253 ntBASIC3.34□□□□□ -1.87
TMEM235A6NFC5 OR5BE1P-201ENST00000425977 939 ntBASIC3.34□□□□□ -1.87
TMEM235A6NFC5 AC006455.6-201ENST00000426192 893 ntBASIC3.34□□□□□ -1.87
TMEM235A6NFC5 RWDD4P2-201ENST00000426392 563 ntBASIC3.34□□□□□ -1.87
TMEM235A6NFC5 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TMEM235A6NFC5 AC083863.1-201ENST00000438811 231 ntBASIC3.34□□□□□ -1.87
TMEM235A6NFC5 RANP8-201ENST00000444720 713 ntBASIC3.34□□□□□ -1.87
TMEM235A6NFC5 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.34□□□□□ -1.87
TMEM235A6NFC5 OR52Y1P-201ENST00000452418 828 ntBASIC3.34□□□□□ -1.87
TMEM235A6NFC5 AC009963.2-201ENST00000453431 138 ntBASIC3.34□□□□□ -1.87
TMEM235A6NFC5 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
TMEM235A6NFC5 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
TMEM235A6NFC5 RWDD4P1-201ENST00000488019 565 ntBASIC3.34□□□□□ -1.87
TMEM235A6NFC5 RN7SL604P-201ENST00000492589 296 ntBASIC3.34□□□□□ -1.87
TMEM235A6NFC5 AC092045.1-201ENST00000495716 1231 ntBASIC3.34□□□□□ -1.87
TMEM235A6NFC5 AC068305.1-201ENST00000497406 726 ntBASIC3.34□□□□□ -1.87
TMEM235A6NFC5 NDUFA5P12-201ENST00000503796 343 ntBASIC3.34□□□□□ -1.87
TMEM235A6NFC5 AK3P4-201ENST00000504283 583 ntBASIC3.34□□□□□ -1.87
TMEM235A6NFC5 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.34□□□□□ -1.87
TMEM235A6NFC5 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
TMEM235A6NFC5 RN7SKP92-201ENST00000517266 244 ntBASIC3.34□□□□□ -1.87
TMEM235A6NFC5 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.34□□□□□ -1.87
TMEM235A6NFC5 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.34□□□□□ -1.87
TMEM235A6NFC5 AC090819.1-201ENST00000523800 1111 ntBASIC3.34□□□□□ -1.87
TMEM235A6NFC5 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.34□□□□□ -1.87
TMEM235A6NFC5 DEFB109D-201ENST00000529497 240 ntBASIC3.34□□□□□ -1.87
TMEM235A6NFC5 AC068831.4-201ENST00000556118 109 ntBASIC3.34□□□□□ -1.87
TMEM235A6NFC5 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC3.34□□□□□ -1.87
TMEM235A6NFC5 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.34□□□□□ -1.87
TMEM235A6NFC5 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.34□□□□□ -1.87
TMEM235A6NFC5 AL390816.3-201ENST00000604527 1066 ntBASIC3.34□□□□□ -1.87
TMEM235A6NFC5 AL391261.4-201ENST00000616012 481 ntBASIC3.34□□□□□ -1.87
TMEM235A6NFC5 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TMEM235A6NFC5 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TMEM235A6NFC5 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC3.34□□□□□ -1.87
TMEM235A6NFC5 OR5BE1P-202ENST00000641168 1176 ntBASIC3.34□□□□□ -1.87
TMEM235A6NFC5 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
TMEM235A6NFC5 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
TMEM235A6NFC5 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.34□□□□□ -1.88
TMEM235A6NFC5 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
TMEM235A6NFC5 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.33□□□□□ -1.88
TMEM235A6NFC5 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TMEM235A6NFC5 AC079741.1-201ENST00000321498 212 ntBASIC3.33□□□□□ -1.88
TMEM235A6NFC5 RNA5SP399-201ENST00000364003 117 ntBASIC3.33□□□□□ -1.88
TMEM235A6NFC5 RNU6-729P-201ENST00000384399 107 ntBASIC3.33□□□□□ -1.88
TMEM235A6NFC5 AL035419.1-201ENST00000397037 564 ntBASIC3.33□□□□□ -1.88
TMEM235A6NFC5 AL161909.1-201ENST00000397390 712 ntBASIC3.33□□□□□ -1.88
TMEM235A6NFC5 RPS3AP23-201ENST00000401762 784 ntBASIC3.33□□□□□ -1.88
TMEM235A6NFC5 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.33□□□□□ -1.88
TMEM235A6NFC5 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.33□□□□□ -1.88
TMEM235A6NFC5 HSPE1P12-201ENST00000412576 301 ntBASIC3.33□□□□□ -1.88
TMEM235A6NFC5 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC3.33□□□□□ -1.88
TMEM235A6NFC5 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC3.33□□□□□ -1.88
TMEM235A6NFC5 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC3.33□□□□□ -1.88
TMEM235A6NFC5 RPL12P28-201ENST00000430852 489 ntBASIC3.33□□□□□ -1.88
TMEM235A6NFC5 BTF3P10-201ENST00000433415 495 ntBASIC3.33□□□□□ -1.88
TMEM235A6NFC5 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.33□□□□□ -1.88
TMEM235A6NFC5 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TMEM235A6NFC5 FHP1-201ENST00000442741 703 ntBASIC3.33□□□□□ -1.88
TMEM235A6NFC5 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC3.33□□□□□ -1.88
TMEM235A6NFC5 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TMEM235A6NFC5 AC020593.1-201ENST00000507399 299 ntBASIC3.33□□□□□ -1.88
TMEM235A6NFC5 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC3.33□□□□□ -1.88
TMEM235A6NFC5 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.33□□□□□ -1.88
TMEM235A6NFC5 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.33□□□□□ -1.88
TMEM235A6NFC5 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
TMEM235A6NFC5 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.33□□□□□ -1.88
TMEM235A6NFC5 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC3.33□□□□□ -1.88
TMEM235A6NFC5 AC051619.2-201ENST00000559063 397 ntBASIC3.33□□□□□ -1.88
TMEM235A6NFC5 AC090877.1-201ENST00000561418 344 ntBASIC3.33□□□□□ -1.88
TMEM235A6NFC5 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.33□□□□□ -1.88
TMEM235A6NFC5 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.33□□□□□ -1.88
TMEM235A6NFC5 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.33□□□□□ -1.88
TMEM235A6NFC5 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC3.33□□□□□ -1.88
TMEM235A6NFC5 AL135786.2-201ENST00000608422 615 ntBASIC3.33□□□□□ -1.88
TMEM235A6NFC5 ATE1-AS1-202ENST00000636460 506 ntBASIC3.33□□□□□ -1.88
TMEM235A6NFC5 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC3.33□□□□□ -1.88
TMEM235A6NFC5 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
TMEM235A6NFC5 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TMEM235A6NFC5 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TMEM235A6NFC5 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TMEM235A6NFC5 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
TMEM235A6NFC5 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TMEM235A6NFC5 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms