Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 AC233968.1-201ENST00000611212 1300 ntBASIC5.68□□□□□ -1.5
CCDC144AA2RUR9 SYF2-202ENST00000354361 926 ntTSL 2 BASIC5.68□□□□□ -1.5
CCDC144AA2RUR9 MIR199A2-201ENST00000385289 110 ntBASIC5.68□□□□□ -1.5
CCDC144AA2RUR9 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC144AA2RUR9 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5.68□□□□□ -1.5
CCDC144AA2RUR9 AL160275.2-201ENST00000412010 394 ntBASIC5.68□□□□□ -1.5
CCDC144AA2RUR9 AC091286.1-201ENST00000431233 461 ntBASIC5.68□□□□□ -1.5
CCDC144AA2RUR9 HLA-N-201ENST00000437516 135 ntBASIC5.68□□□□□ -1.5
CCDC144AA2RUR9 CYCSP43-201ENST00000438233 310 ntBASIC5.68□□□□□ -1.5
CCDC144AA2RUR9 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC144AA2RUR9 AC006499.5-201ENST00000505037 514 ntBASIC5.68□□□□□ -1.5
CCDC144AA2RUR9 AC093853.1-201ENST00000515689 483 ntBASIC5.68□□□□□ -1.5
CCDC144AA2RUR9 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC5.68□□□□□ -1.5
CCDC144AA2RUR9 AL121834.1-201ENST00000572284 509 ntBASIC5.68□□□□□ -1.5
CCDC144AA2RUR9 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC5.68□□□□□ -1.5
CCDC144AA2RUR9 SRGNP1-201ENST00000603392 451 ntBASIC5.68□□□□□ -1.5
CCDC144AA2RUR9 AC019176.2-201ENST00000611579 315 ntBASIC5.68□□□□□ -1.5
CCDC144AA2RUR9 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC144AA2RUR9 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC144AA2RUR9 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC5.68□□□□□ -1.5
CCDC144AA2RUR9 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC144AA2RUR9 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.68□□□□□ -1.5
CCDC144AA2RUR9 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.68□□□□□ -1.5
CCDC144AA2RUR9 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CCDC144AA2RUR9 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CCDC144AA2RUR9 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC144AA2RUR9 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC144AA2RUR9 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC144AA2RUR9 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
CCDC144AA2RUR9 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
CCDC144AA2RUR9 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CCDC144AA2RUR9 RPS24P12-201ENST00000402084 394 ntBASIC5.67□□□□□ -1.5
CCDC144AA2RUR9 SNORA3C-201ENST00000408792 125 ntBASIC5.67□□□□□ -1.5
CCDC144AA2RUR9 RNA5SP296-201ENST00000410523 111 ntBASIC5.67□□□□□ -1.5
CCDC144AA2RUR9 ZNF736P2Y-201ENST00000416040 1279 ntBASIC5.67□□□□□ -1.5
CCDC144AA2RUR9 OR4F13P-201ENST00000428478 931 ntBASIC5.67□□□□□ -1.5
CCDC144AA2RUR9 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC144AA2RUR9 RPS3AP12-201ENST00000443616 753 ntBASIC5.67□□□□□ -1.5
CCDC144AA2RUR9 RPL5P30-201ENST00000465511 891 ntBASIC5.67□□□□□ -1.5
CCDC144AA2RUR9 RPS3AP6-201ENST00000484430 795 ntBASIC5.67□□□□□ -1.5
CCDC144AA2RUR9 PPBPP1-201ENST00000510807 373 ntBASIC5.67□□□□□ -1.5
CCDC144AA2RUR9 RNA5SP154-201ENST00000516193 111 ntBASIC5.67□□□□□ -1.5
CCDC144AA2RUR9 SCARNA13-201ENST00000516672 275 ntBASIC5.67□□□□□ -1.5
CCDC144AA2RUR9 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC144AA2RUR9 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.67□□□□□ -1.5
CCDC144AA2RUR9 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC144AA2RUR9 BNIP3P19-201ENST00000605397 577 ntBASIC5.67□□□□□ -1.5
CCDC144AA2RUR9 AL391261.4-201ENST00000616012 481 ntBASIC5.67□□□□□ -1.5
CCDC144AA2RUR9 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC144AA2RUR9 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC144AA2RUR9 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC144AA2RUR9 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC144AA2RUR9 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
CCDC144AA2RUR9 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC144AA2RUR9 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.66□□□□□ -1.5
CCDC144AA2RUR9 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC5.66□□□□□ -1.5
CCDC144AA2RUR9 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC5.66□□□□□ -1.5
CCDC144AA2RUR9 Z74696.2-201ENST00000436514 498 ntBASIC5.66□□□□□ -1.5
CCDC144AA2RUR9 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC5.66□□□□□ -1.5
CCDC144AA2RUR9 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC5.66□□□□□ -1.5
CCDC144AA2RUR9 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.66□□□□□ -1.5
CCDC144AA2RUR9 AC096577.2-201ENST00000611455 153 ntBASIC5.66□□□□□ -1.5
CCDC144AA2RUR9 AL773545.4-201ENST00000637262 310 ntBASIC5.66□□□□□ -1.5
CCDC144AA2RUR9 AL513478.4-201ENST00000641636 310 ntBASIC5.66□□□□□ -1.5
CCDC144AA2RUR9 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC144AA2RUR9 AP004289.2-201ENST00000444413 1457 ntBASIC5.66□□□□□ -1.5
CCDC144AA2RUR9 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
CCDC144AA2RUR9 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC144AA2RUR9 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC144AA2RUR9 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC144AA2RUR9 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC144AA2RUR9 AC007066.1-201ENST00000392902 381 ntBASIC5.65□□□□□ -1.5
CCDC144AA2RUR9 RPL7AP73-201ENST00000413490 353 ntBASIC5.65□□□□□ -1.5
CCDC144AA2RUR9 KRR1P1-201ENST00000419430 803 ntBASIC5.65□□□□□ -1.5
CCDC144AA2RUR9 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC144AA2RUR9 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC144AA2RUR9 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC144AA2RUR9 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC144AA2RUR9 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.65□□□□□ -1.5
CCDC144AA2RUR9 OR7A8P-201ENST00000595427 913 ntBASIC5.65□□□□□ -1.5
CCDC144AA2RUR9 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC144AA2RUR9 AC015813.4-201ENST00000610469 179 ntBASIC5.65□□□□□ -1.5
CCDC144AA2RUR9 AC015967.1-201ENST00000619893 476 ntBASIC5.65□□□□□ -1.5
CCDC144AA2RUR9 AC095038.2-201ENST00000621464 1070 ntBASIC5.65□□□□□ -1.5
CCDC144AA2RUR9 AC007342.8-201ENST00000623278 678 ntBASIC5.65□□□□□ -1.5
CCDC144AA2RUR9 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC144AA2RUR9 AC005261.2-201ENST00000593427 4258 ntBASIC5.65□□□□□ -1.5
CCDC144AA2RUR9 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC5.65□□□□□ -1.5
CCDC144AA2RUR9 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CCDC144AA2RUR9 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
CCDC144AA2RUR9 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CCDC144AA2RUR9 SNORA5A-201ENST00000384111 134 ntBASIC5.65□□□□□ -1.51
CCDC144AA2RUR9 EIF4EBP2P3-201ENST00000403144 334 ntBASIC5.65□□□□□ -1.51
CCDC144AA2RUR9 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC5.65□□□□□ -1.51
CCDC144AA2RUR9 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.65□□□□□ -1.51
CCDC144AA2RUR9 AC010469.1-201ENST00000463864 576 ntBASIC5.65□□□□□ -1.51
CCDC144AA2RUR9 AC017037.1-201ENST00000508460 471 ntBASIC5.65□□□□□ -1.51
CCDC144AA2RUR9 IGKV2-38-201ENST00000517443 247 ntBASIC5.65□□□□□ -1.51
CCDC144AA2RUR9 DUXAP2-201ENST00000519198 589 ntBASIC5.65□□□□□ -1.51
CCDC144AA2RUR9 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms