Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.45■□□□□ 0.7
PKP3Q9Y446 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PKP3Q9Y446 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PKP3Q9Y446 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PKP3Q9Y446 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.45■□□□□ 0.7
PKP3Q9Y446 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PKP3Q9Y446 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PKP3Q9Y446 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PKP3Q9Y446 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PKP3Q9Y446 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.44■□□□□ 0.7
PKP3Q9Y446 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PKP3Q9Y446 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.44■□□□□ 0.7
PKP3Q9Y446 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PKP3Q9Y446 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PKP3Q9Y446 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
PKP3Q9Y446 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.44■□□□□ 0.7
PKP3Q9Y446 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.44■□□□□ 0.7
PKP3Q9Y446 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PKP3Q9Y446 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.44■□□□□ 0.7
PKP3Q9Y446 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PKP3Q9Y446 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.44■□□□□ 0.7
PKP3Q9Y446 C1QL1P1-201ENST00000568105 661 ntBASIC19.44■□□□□ 0.7
PKP3Q9Y446 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.44■□□□□ 0.7
PKP3Q9Y446 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.44■□□□□ 0.7
PKP3Q9Y446 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PKP3Q9Y446 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PKP3Q9Y446 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PKP3Q9Y446 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.44■□□□□ 0.7
PKP3Q9Y446 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PKP3Q9Y446 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
PKP3Q9Y446 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.44■□□□□ 0.7
PKP3Q9Y446 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PKP3Q9Y446 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PKP3Q9Y446 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PKP3Q9Y446 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PKP3Q9Y446 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PKP3Q9Y446 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PKP3Q9Y446 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.43■□□□□ 0.7
PKP3Q9Y446 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PKP3Q9Y446 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.43■□□□□ 0.7
PKP3Q9Y446 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PKP3Q9Y446 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PKP3Q9Y446 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PKP3Q9Y446 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PKP3Q9Y446 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PKP3Q9Y446 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PKP3Q9Y446 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.43■□□□□ 0.7
PKP3Q9Y446 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.43■□□□□ 0.7
PKP3Q9Y446 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PKP3Q9Y446 AL158047.1-201ENST00000445918 881 ntBASIC19.43■□□□□ 0.7
PKP3Q9Y446 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.43■□□□□ 0.7
PKP3Q9Y446 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
PKP3Q9Y446 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PKP3Q9Y446 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
PKP3Q9Y446 TMEM191A-211ENST00000637163 1067 ntBASIC19.43■□□□□ 0.7
PKP3Q9Y446 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
PKP3Q9Y446 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PKP3Q9Y446 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PKP3Q9Y446 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PKP3Q9Y446 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PKP3Q9Y446 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PKP3Q9Y446 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PKP3Q9Y446 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.43■□□□□ 0.7
PKP3Q9Y446 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PKP3Q9Y446 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.43■□□□□ 0.7
PKP3Q9Y446 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PKP3Q9Y446 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PKP3Q9Y446 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PKP3Q9Y446 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.42■□□□□ 0.7
PKP3Q9Y446 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PKP3Q9Y446 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PKP3Q9Y446 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PKP3Q9Y446 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PKP3Q9Y446 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.42■□□□□ 0.7
PKP3Q9Y446 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PKP3Q9Y446 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
PKP3Q9Y446 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.42■□□□□ 0.7
PKP3Q9Y446 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.42■□□□□ 0.7
PKP3Q9Y446 AC098590.1-201ENST00000468126 897 ntBASIC19.42■□□□□ 0.7
PKP3Q9Y446 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PKP3Q9Y446 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.42■□□□□ 0.7
PKP3Q9Y446 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.42■□□□□ 0.7
PKP3Q9Y446 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.42■□□□□ 0.7
PKP3Q9Y446 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.42■□□□□ 0.7
PKP3Q9Y446 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PKP3Q9Y446 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PKP3Q9Y446 RNF165-205ENST00000588679 2904 ntBASIC19.42■□□□□ 0.7
PKP3Q9Y446 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.42■□□□□ 0.7
PKP3Q9Y446 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PKP3Q9Y446 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PKP3Q9Y446 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.42■□□□□ 0.7
PKP3Q9Y446 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PKP3Q9Y446 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PKP3Q9Y446 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PKP3Q9Y446 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PKP3Q9Y446 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PKP3Q9Y446 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PKP3Q9Y446 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
PKP3Q9Y446 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PKP3Q9Y446 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms