Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.86■□□□□ 0.93
CXXC1Q9P0U4 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC20.86■□□□□ 0.93
CXXC1Q9P0U4 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.86■□□□□ 0.93
CXXC1Q9P0U4 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CXXC1Q9P0U4 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.86■□□□□ 0.93
CXXC1Q9P0U4 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.86■□□□□ 0.93
CXXC1Q9P0U4 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CXXC1Q9P0U4 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CXXC1Q9P0U4 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CXXC1Q9P0U4 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.86■□□□□ 0.93
CXXC1Q9P0U4 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CXXC1Q9P0U4 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CXXC1Q9P0U4 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CXXC1Q9P0U4 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CXXC1Q9P0U4 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CXXC1Q9P0U4 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CXXC1Q9P0U4 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CXXC1Q9P0U4 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CXXC1Q9P0U4 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CXXC1Q9P0U4 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CXXC1Q9P0U4 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CXXC1Q9P0U4 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CXXC1Q9P0U4 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20.85■□□□□ 0.93
CXXC1Q9P0U4 FAAHP1-202ENST00000446499 1238 ntBASIC20.85■□□□□ 0.93
CXXC1Q9P0U4 TSSC2-201ENST00000450217 709 ntBASIC20.85■□□□□ 0.93
CXXC1Q9P0U4 AC009078.2-202ENST00000463353 338 ntBASIC20.85■□□□□ 0.93
CXXC1Q9P0U4 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.85■□□□□ 0.93
CXXC1Q9P0U4 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.85■□□□□ 0.93
CXXC1Q9P0U4 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.85■□□□□ 0.93
CXXC1Q9P0U4 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.85■□□□□ 0.93
CXXC1Q9P0U4 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CXXC1Q9P0U4 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.85■□□□□ 0.93
CXXC1Q9P0U4 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CXXC1Q9P0U4 KRT8P11-201ENST00000409686 1436 ntBASIC20.85■□□□□ 0.93
CXXC1Q9P0U4 AC016734.2-201ENST00000624325 1377 ntBASIC20.85■□□□□ 0.93
CXXC1Q9P0U4 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CXXC1Q9P0U4 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.84■□□□□ 0.93
CXXC1Q9P0U4 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CXXC1Q9P0U4 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.84■□□□□ 0.93
CXXC1Q9P0U4 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CXXC1Q9P0U4 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CXXC1Q9P0U4 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
CXXC1Q9P0U4 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CXXC1Q9P0U4 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CXXC1Q9P0U4 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.84■□□□□ 0.93
CXXC1Q9P0U4 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CXXC1Q9P0U4 AP002383.4-201ENST00000442518 975 ntBASIC20.84■□□□□ 0.93
CXXC1Q9P0U4 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CXXC1Q9P0U4 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CXXC1Q9P0U4 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.84■□□□□ 0.93
CXXC1Q9P0U4 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CXXC1Q9P0U4 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CXXC1Q9P0U4 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CXXC1Q9P0U4 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CXXC1Q9P0U4 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.84■□□□□ 0.93
CXXC1Q9P0U4 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CXXC1Q9P0U4 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.83■□□□□ 0.93
CXXC1Q9P0U4 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
CXXC1Q9P0U4 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CXXC1Q9P0U4 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.83■□□□□ 0.93
CXXC1Q9P0U4 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CXXC1Q9P0U4 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC20.83■□□□□ 0.93
CXXC1Q9P0U4 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.83■□□□□ 0.93
CXXC1Q9P0U4 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.83■□□□□ 0.93
CXXC1Q9P0U4 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CXXC1Q9P0U4 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.83■□□□□ 0.92
CXXC1Q9P0U4 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CXXC1Q9P0U4 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.83■□□□□ 0.92
CXXC1Q9P0U4 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CXXC1Q9P0U4 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CXXC1Q9P0U4 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CXXC1Q9P0U4 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.82■□□□□ 0.92
CXXC1Q9P0U4 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CXXC1Q9P0U4 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.82■□□□□ 0.92
CXXC1Q9P0U4 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.82■□□□□ 0.92
CXXC1Q9P0U4 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CXXC1Q9P0U4 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.82■□□□□ 0.92
CXXC1Q9P0U4 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CXXC1Q9P0U4 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.82■□□□□ 0.92
CXXC1Q9P0U4 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.82■□□□□ 0.92
CXXC1Q9P0U4 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.82■□□□□ 0.92
CXXC1Q9P0U4 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
CXXC1Q9P0U4 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.82■□□□□ 0.92
CXXC1Q9P0U4 AC011498.5-201ENST00000592027 486 ntBASIC20.82■□□□□ 0.92
CXXC1Q9P0U4 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.82■□□□□ 0.92
CXXC1Q9P0U4 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CXXC1Q9P0U4 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.82■□□□□ 0.92
CXXC1Q9P0U4 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CXXC1Q9P0U4 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CXXC1Q9P0U4 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CXXC1Q9P0U4 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CXXC1Q9P0U4 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.82■□□□□ 0.92
CXXC1Q9P0U4 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.81■□□□□ 0.92
CXXC1Q9P0U4 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CXXC1Q9P0U4 RASA4DP-201ENST00000460726 1199 ntBASIC20.81■□□□□ 0.92
CXXC1Q9P0U4 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC20.81■□□□□ 0.92
CXXC1Q9P0U4 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.81■□□□□ 0.92
CXXC1Q9P0U4 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CXXC1Q9P0U4 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CXXC1Q9P0U4 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms