Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HPS4Q9NQG7 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.05■□□□□ 0.8
HPS4Q9NQG7 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.05■□□□□ 0.8
HPS4Q9NQG7 AC128688.1-201ENST00000487626 519 ntBASIC20.05■□□□□ 0.8
HPS4Q9NQG7 Z85996.1-201ENST00000494644 937 ntBASIC20.05■□□□□ 0.8
HPS4Q9NQG7 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.05■□□□□ 0.8
HPS4Q9NQG7 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HPS4Q9NQG7 AC096733.2-201ENST00000609937 1394 ntBASIC20.05■□□□□ 0.8
HPS4Q9NQG7 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.05■□□□□ 0.8
HPS4Q9NQG7 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
HPS4Q9NQG7 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HPS4Q9NQG7 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
HPS4Q9NQG7 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.04■□□□□ 0.8
HPS4Q9NQG7 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HPS4Q9NQG7 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HPS4Q9NQG7 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HPS4Q9NQG7 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HPS4Q9NQG7 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
HPS4Q9NQG7 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HPS4Q9NQG7 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HPS4Q9NQG7 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
HPS4Q9NQG7 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
HPS4Q9NQG7 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
HPS4Q9NQG7 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
HPS4Q9NQG7 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HPS4Q9NQG7 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
HPS4Q9NQG7 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HPS4Q9NQG7 MFAP1P1-201ENST00000442257 1255 ntBASIC20.04■□□□□ 0.8
HPS4Q9NQG7 FAM207BP-201ENST00000447172 505 ntBASIC20.04■□□□□ 0.8
HPS4Q9NQG7 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HPS4Q9NQG7 AC091390.4-202ENST00000476426 537 ntBASIC20.04■□□□□ 0.8
HPS4Q9NQG7 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.04■□□□□ 0.8
HPS4Q9NQG7 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.04■□□□□ 0.8
HPS4Q9NQG7 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.04■□□□□ 0.8
HPS4Q9NQG7 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.04■□□□□ 0.8
HPS4Q9NQG7 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
HPS4Q9NQG7 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
HPS4Q9NQG7 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HPS4Q9NQG7 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.04■□□□□ 0.8
HPS4Q9NQG7 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.04■□□□□ 0.8
HPS4Q9NQG7 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.04■□□□□ 0.8
HPS4Q9NQG7 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HPS4Q9NQG7 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
HPS4Q9NQG7 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HPS4Q9NQG7 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HPS4Q9NQG7 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.03■□□□□ 0.8
HPS4Q9NQG7 KRT8P8-201ENST00000434750 1448 ntBASIC20.03■□□□□ 0.8
HPS4Q9NQG7 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.03■□□□□ 0.8
HPS4Q9NQG7 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HPS4Q9NQG7 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HPS4Q9NQG7 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HPS4Q9NQG7 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HPS4Q9NQG7 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.03■□□□□ 0.8
HPS4Q9NQG7 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.03■□□□□ 0.8
HPS4Q9NQG7 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HPS4Q9NQG7 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HPS4Q9NQG7 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HPS4Q9NQG7 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HPS4Q9NQG7 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.03■□□□□ 0.8
HPS4Q9NQG7 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HPS4Q9NQG7 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HPS4Q9NQG7 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HPS4Q9NQG7 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
HPS4Q9NQG7 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
HPS4Q9NQG7 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
HPS4Q9NQG7 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
HPS4Q9NQG7 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HPS4Q9NQG7 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HPS4Q9NQG7 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
HPS4Q9NQG7 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HPS4Q9NQG7 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
HPS4Q9NQG7 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.02■□□□□ 0.8
HPS4Q9NQG7 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
HPS4Q9NQG7 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
HPS4Q9NQG7 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HPS4Q9NQG7 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HPS4Q9NQG7 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.02■□□□□ 0.8
HPS4Q9NQG7 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.02■□□□□ 0.8
HPS4Q9NQG7 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HPS4Q9NQG7 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
HPS4Q9NQG7 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HPS4Q9NQG7 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
HPS4Q9NQG7 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
HPS4Q9NQG7 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HPS4Q9NQG7 AC138932.1-201ENST00000534164 6830 ntBASIC20.02■□□□□ 0.79
HPS4Q9NQG7 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
HPS4Q9NQG7 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.79
HPS4Q9NQG7 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HPS4Q9NQG7 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.02■□□□□ 0.79
HPS4Q9NQG7 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.02■□□□□ 0.79
HPS4Q9NQG7 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
HPS4Q9NQG7 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HPS4Q9NQG7 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
HPS4Q9NQG7 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HPS4Q9NQG7 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
HPS4Q9NQG7 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HPS4Q9NQG7 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.01■□□□□ 0.79
HPS4Q9NQG7 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HPS4Q9NQG7 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.01■□□□□ 0.79
HPS4Q9NQG7 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms