Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH23Q9H251 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.65■□□□□ 0.9
CDH23Q9H251 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.65■□□□□ 0.9
CDH23Q9H251 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDH23Q9H251 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.65■□□□□ 0.9
CDH23Q9H251 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC20.65■□□□□ 0.9
CDH23Q9H251 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
CDH23Q9H251 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDH23Q9H251 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDH23Q9H251 CA15P1-201ENST00000481698 905 ntBASIC20.65■□□□□ 0.9
CDH23Q9H251 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CDH23Q9H251 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.65■□□□□ 0.9
CDH23Q9H251 KRT8P17-201ENST00000453110 1448 ntBASIC20.65■□□□□ 0.9
CDH23Q9H251 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDH23Q9H251 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.65■□□□□ 0.9
CDH23Q9H251 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDH23Q9H251 NUS1P1-201ENST00000446295 882 ntBASIC20.65■□□□□ 0.9
CDH23Q9H251 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.65■□□□□ 0.9
CDH23Q9H251 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC20.65■□□□□ 0.9
CDH23Q9H251 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CDH23Q9H251 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
CDH23Q9H251 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CDH23Q9H251 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CDH23Q9H251 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDH23Q9H251 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDH23Q9H251 KRT18P31-201ENST00000506277 1292 ntBASIC20.64■□□□□ 0.89
CDH23Q9H251 PENK-208ENST00000523051 772 ntTSL 5 BASIC20.64■□□□□ 0.89
CDH23Q9H251 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
CDH23Q9H251 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDH23Q9H251 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDH23Q9H251 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
CDH23Q9H251 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
CDH23Q9H251 MIR1233-2-201ENST00000408138 82 ntBASIC20.64■□□□□ 0.89
CDH23Q9H251 MIR1233-1-201ENST00000408722 82 ntBASIC20.64■□□□□ 0.89
CDH23Q9H251 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.64■□□□□ 0.89
CDH23Q9H251 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDH23Q9H251 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDH23Q9H251 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDH23Q9H251 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDH23Q9H251 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.63■□□□□ 0.89
CDH23Q9H251 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.63■□□□□ 0.89
CDH23Q9H251 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDH23Q9H251 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.63■□□□□ 0.89
CDH23Q9H251 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.63■□□□□ 0.89
CDH23Q9H251 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CDH23Q9H251 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDH23Q9H251 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
CDH23Q9H251 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDH23Q9H251 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CDH23Q9H251 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC20.63■□□□□ 0.89
CDH23Q9H251 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDH23Q9H251 IL9RP2-201ENST00000423948 1312 ntBASIC20.63■□□□□ 0.89
CDH23Q9H251 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.63■□□□□ 0.89
CDH23Q9H251 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDH23Q9H251 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.63■□□□□ 0.89
CDH23Q9H251 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CDH23Q9H251 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CDH23Q9H251 KRT8P8-201ENST00000434750 1448 ntBASIC20.63■□□□□ 0.89
CDH23Q9H251 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.62■□□□□ 0.89
CDH23Q9H251 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDH23Q9H251 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDH23Q9H251 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDH23Q9H251 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDH23Q9H251 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CDH23Q9H251 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CDH23Q9H251 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC20.62■□□□□ 0.89
CDH23Q9H251 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.62■□□□□ 0.89
CDH23Q9H251 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDH23Q9H251 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.62■□□□□ 0.89
CDH23Q9H251 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.62■□□□□ 0.89
CDH23Q9H251 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CDH23Q9H251 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDH23Q9H251 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDH23Q9H251 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDH23Q9H251 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDH23Q9H251 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDH23Q9H251 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC20.62■□□□□ 0.89
CDH23Q9H251 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.62■□□□□ 0.89
CDH23Q9H251 AL355385.1-201ENST00000606123 409 ntBASIC20.62■□□□□ 0.89
CDH23Q9H251 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.61■□□□□ 0.89
CDH23Q9H251 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDH23Q9H251 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.61■□□□□ 0.89
CDH23Q9H251 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CDH23Q9H251 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDH23Q9H251 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
CDH23Q9H251 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDH23Q9H251 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.61■□□□□ 0.89
CDH23Q9H251 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDH23Q9H251 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.61■□□□□ 0.89
CDH23Q9H251 AC133561.1-201ENST00000568600 2415 ntBASIC20.61■□□□□ 0.89
CDH23Q9H251 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDH23Q9H251 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CDH23Q9H251 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.61■□□□□ 0.89
CDH23Q9H251 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CDH23Q9H251 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.61■□□□□ 0.89
CDH23Q9H251 TSSC2-201ENST00000450217 709 ntBASIC20.61■□□□□ 0.89
CDH23Q9H251 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDH23Q9H251 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CDH23Q9H251 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDH23Q9H251 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms