Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
RAB43Q86YS6 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB43Q86YS6 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
RAB43Q86YS6 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
RAB43Q86YS6 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.49■□□□□ 0.55
RAB43Q86YS6 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB43Q86YS6 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.49■□□□□ 0.55
RAB43Q86YS6 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAB43Q86YS6 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAB43Q86YS6 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RAB43Q86YS6 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RAB43Q86YS6 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAB43Q86YS6 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAB43Q86YS6 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RAB43Q86YS6 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAB43Q86YS6 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RAB43Q86YS6 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.48■□□□□ 0.55
RAB43Q86YS6 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAB43Q86YS6 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAB43Q86YS6 UNC93B2-201ENST00000285383 730 ntBASIC18.48■□□□□ 0.55
RAB43Q86YS6 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RAB43Q86YS6 MIR1224-201ENST00000408193 85 ntBASIC18.48■□□□□ 0.55
RAB43Q86YS6 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.48■□□□□ 0.55
RAB43Q86YS6 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RAB43Q86YS6 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.48■□□□□ 0.55
RAB43Q86YS6 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
RAB43Q86YS6 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.48■□□□□ 0.55
RAB43Q86YS6 AC097493.4-201ENST00000641197 219 ntBASIC18.48■□□□□ 0.55
RAB43Q86YS6 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAB43Q86YS6 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAB43Q86YS6 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RAB43Q86YS6 KRT16P1-201ENST00000399124 1418 ntBASIC18.48■□□□□ 0.55
RAB43Q86YS6 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
RAB43Q86YS6 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.48■□□□□ 0.55
RAB43Q86YS6 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAB43Q86YS6 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RAB43Q86YS6 BX323043.1-201ENST00000641006 1765 ntBASIC18.47■□□□□ 0.55
RAB43Q86YS6 AC092720.2-201ENST00000602388 1665 ntBASIC18.47■□□□□ 0.55
RAB43Q86YS6 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAB43Q86YS6 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAB43Q86YS6 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.47■□□□□ 0.55
RAB43Q86YS6 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RAB43Q86YS6 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RAB43Q86YS6 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAB43Q86YS6 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAB43Q86YS6 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAB43Q86YS6 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAB43Q86YS6 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.47■□□□□ 0.55
RAB43Q86YS6 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAB43Q86YS6 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.47■□□□□ 0.55
RAB43Q86YS6 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAB43Q86YS6 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.47■□□□□ 0.55
RAB43Q86YS6 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.47■□□□□ 0.55
RAB43Q86YS6 CR392000.1-201ENST00000624770 1228 ntBASIC18.47■□□□□ 0.55
RAB43Q86YS6 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RAB43Q86YS6 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAB43Q86YS6 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAB43Q86YS6 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAB43Q86YS6 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAB43Q86YS6 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
RAB43Q86YS6 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAB43Q86YS6 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.47■□□□□ 0.55
RAB43Q86YS6 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.47■□□□□ 0.55
RAB43Q86YS6 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAB43Q86YS6 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAB43Q86YS6 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RAB43Q86YS6 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAB43Q86YS6 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RAB43Q86YS6 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RAB43Q86YS6 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RAB43Q86YS6 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RAB43Q86YS6 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
RAB43Q86YS6 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RAB43Q86YS6 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
RAB43Q86YS6 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
RAB43Q86YS6 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RAB43Q86YS6 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
RAB43Q86YS6 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.46■□□□□ 0.55
RAB43Q86YS6 RBM17P1-201ENST00000453646 1190 ntBASIC18.46■□□□□ 0.55
RAB43Q86YS6 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RAB43Q86YS6 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.46■□□□□ 0.55
RAB43Q86YS6 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.46■□□□□ 0.55
RAB43Q86YS6 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.46■□□□□ 0.55
RAB43Q86YS6 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RAB43Q86YS6 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.46■□□□□ 0.55
RAB43Q86YS6 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.46■□□□□ 0.55
RAB43Q86YS6 SMG8-203ENST00000578922 2178 ntBASIC18.46■□□□□ 0.55
RAB43Q86YS6 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RAB43Q86YS6 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
RAB43Q86YS6 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RAB43Q86YS6 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
RAB43Q86YS6 AC007225.1-201ENST00000566331 1836 ntBASIC18.46■□□□□ 0.55
RAB43Q86YS6 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
RAB43Q86YS6 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
RAB43Q86YS6 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
RAB43Q86YS6 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RAB43Q86YS6 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
RAB43Q86YS6 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.45■□□□□ 0.54
RAB43Q86YS6 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RAB43Q86YS6 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms