Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.91■□□□□ 0.62
CACNA1EQ15878 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CACNA1EQ15878 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.91■□□□□ 0.62
CACNA1EQ15878 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.91■□□□□ 0.62
CACNA1EQ15878 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CACNA1EQ15878 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CACNA1EQ15878 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CACNA1EQ15878 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CACNA1EQ15878 KRT8P45-201ENST00000414328 1447 ntBASIC18.91■□□□□ 0.62
CACNA1EQ15878 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CACNA1EQ15878 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CACNA1EQ15878 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CACNA1EQ15878 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CACNA1EQ15878 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.9■□□□□ 0.62
CACNA1EQ15878 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CACNA1EQ15878 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.9■□□□□ 0.62
CACNA1EQ15878 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.9■□□□□ 0.62
CACNA1EQ15878 VENTXP5-201ENST00000523979 775 ntBASIC18.9■□□□□ 0.62
CACNA1EQ15878 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
CACNA1EQ15878 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.9■□□□□ 0.62
CACNA1EQ15878 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.9■□□□□ 0.62
CACNA1EQ15878 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.9■□□□□ 0.62
CACNA1EQ15878 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.9■□□□□ 0.62
CACNA1EQ15878 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CACNA1EQ15878 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.9■□□□□ 0.62
CACNA1EQ15878 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CACNA1EQ15878 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.9■□□□□ 0.62
CACNA1EQ15878 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CACNA1EQ15878 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CACNA1EQ15878 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.9■□□□□ 0.62
CACNA1EQ15878 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CACNA1EQ15878 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.9■□□□□ 0.62
CACNA1EQ15878 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CACNA1EQ15878 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.9■□□□□ 0.62
CACNA1EQ15878 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CACNA1EQ15878 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.9■□□□□ 0.62
CACNA1EQ15878 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.9■□□□□ 0.62
CACNA1EQ15878 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CACNA1EQ15878 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CACNA1EQ15878 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.9■□□□□ 0.62
CACNA1EQ15878 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.9■□□□□ 0.62
CACNA1EQ15878 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CACNA1EQ15878 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CACNA1EQ15878 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CACNA1EQ15878 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CACNA1EQ15878 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CACNA1EQ15878 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CACNA1EQ15878 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CACNA1EQ15878 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.89■□□□□ 0.61
CACNA1EQ15878 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.89■□□□□ 0.61
CACNA1EQ15878 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CACNA1EQ15878 AC023511.2-201ENST00000618803 211 ntBASIC18.89■□□□□ 0.61
CACNA1EQ15878 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CACNA1EQ15878 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CACNA1EQ15878 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CACNA1EQ15878 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.89■□□□□ 0.61
CACNA1EQ15878 SPDYE15P-201ENST00000424157 909 ntBASIC18.89■□□□□ 0.61
CACNA1EQ15878 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.89■□□□□ 0.61
CACNA1EQ15878 ZNF444P1-201ENST00000559497 298 ntBASIC18.89■□□□□ 0.61
CACNA1EQ15878 MIR3180-1-201ENST00000580374 94 ntBASIC18.89■□□□□ 0.61
CACNA1EQ15878 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.89■□□□□ 0.61
CACNA1EQ15878 MIR3180-3-201ENST00000584616 94 ntBASIC18.89■□□□□ 0.61
CACNA1EQ15878 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CACNA1EQ15878 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CACNA1EQ15878 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.89■□□□□ 0.61
CACNA1EQ15878 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CACNA1EQ15878 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CACNA1EQ15878 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CACNA1EQ15878 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.88■□□□□ 0.61
CACNA1EQ15878 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.88■□□□□ 0.61
CACNA1EQ15878 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CACNA1EQ15878 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.88■□□□□ 0.61
CACNA1EQ15878 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.88■□□□□ 0.61
CACNA1EQ15878 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
CACNA1EQ15878 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.88■□□□□ 0.61
CACNA1EQ15878 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CACNA1EQ15878 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.88■□□□□ 0.61
CACNA1EQ15878 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CACNA1EQ15878 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CACNA1EQ15878 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.88■□□□□ 0.61
CACNA1EQ15878 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CACNA1EQ15878 KRT8P11-201ENST00000409686 1436 ntBASIC18.88■□□□□ 0.61
CACNA1EQ15878 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CACNA1EQ15878 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.88■□□□□ 0.61
CACNA1EQ15878 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.88■□□□□ 0.61
CACNA1EQ15878 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.88■□□□□ 0.61
CACNA1EQ15878 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.88■□□□□ 0.61
CACNA1EQ15878 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CACNA1EQ15878 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CACNA1EQ15878 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.87■□□□□ 0.61
CACNA1EQ15878 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CACNA1EQ15878 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.87■□□□□ 0.61
CACNA1EQ15878 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.87■□□□□ 0.61
CACNA1EQ15878 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.87■□□□□ 0.61
CACNA1EQ15878 FDX1P1-201ENST00000449115 551 ntBASIC18.87■□□□□ 0.61
CACNA1EQ15878 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.87■□□□□ 0.61
CACNA1EQ15878 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.87■□□□□ 0.61
CACNA1EQ15878 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CACNA1EQ15878 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.87■□□□□ 0.61
CACNA1EQ15878 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms