Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.3■□□□□ 0.84
SLC1A1P43005 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.3■□□□□ 0.84
SLC1A1P43005 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC1A1P43005 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC1A1P43005 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC1A1P43005 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLC1A1P43005 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC1A1P43005 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC1A1P43005 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
SLC1A1P43005 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC1A1P43005 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC1A1P43005 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC1A1P43005 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SLC1A1P43005 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.29■□□□□ 0.84
SLC1A1P43005 AC008687.6-201ENST00000596318 630 ntBASIC20.29■□□□□ 0.84
SLC1A1P43005 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.29■□□□□ 0.84
SLC1A1P43005 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
SLC1A1P43005 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC1A1P43005 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC1A1P43005 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLC1A1P43005 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLC1A1P43005 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC1A1P43005 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLC1A1P43005 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLC1A1P43005 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC1A1P43005 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.28■□□□□ 0.84
SLC1A1P43005 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC1A1P43005 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SLC1A1P43005 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SLC1A1P43005 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.28■□□□□ 0.84
SLC1A1P43005 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC1A1P43005 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
SLC1A1P43005 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SLC1A1P43005 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC1A1P43005 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
SLC1A1P43005 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC1A1P43005 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
SLC1A1P43005 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SLC1A1P43005 TUBB8P6-201ENST00000436895 1288 ntBASIC20.28■□□□□ 0.84
SLC1A1P43005 AC069152.1-201ENST00000438030 544 ntBASIC20.28■□□□□ 0.84
SLC1A1P43005 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.28■□□□□ 0.84
SLC1A1P43005 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC1A1P43005 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SLC1A1P43005 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.28■□□□□ 0.84
SLC1A1P43005 SOX15-203ENST00000570788 1093 ntBASIC20.28■□□□□ 0.84
SLC1A1P43005 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.28■□□□□ 0.84
SLC1A1P43005 AL109923.1-201ENST00000618799 583 ntBASIC20.28■□□□□ 0.84
SLC1A1P43005 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC1A1P43005 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.28■□□□□ 0.84
SLC1A1P43005 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.28■□□□□ 0.84
SLC1A1P43005 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.28■□□□□ 0.84
SLC1A1P43005 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SLC1A1P43005 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
SLC1A1P43005 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC1A1P43005 SDHAP1-207ENST00000440850 2000 ntBASIC20.27■□□□□ 0.84
SLC1A1P43005 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SLC1A1P43005 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SLC1A1P43005 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SLC1A1P43005 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.27■□□□□ 0.84
SLC1A1P43005 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SLC1A1P43005 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC1A1P43005 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.27■□□□□ 0.84
SLC1A1P43005 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC1A1P43005 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.27■□□□□ 0.84
SLC1A1P43005 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.27■□□□□ 0.84
SLC1A1P43005 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.27■□□□□ 0.84
SLC1A1P43005 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.27■□□□□ 0.84
SLC1A1P43005 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.27■□□□□ 0.84
SLC1A1P43005 AC098934.4-201ENST00000564127 592 ntBASIC20.27■□□□□ 0.84
SLC1A1P43005 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC1A1P43005 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SLC1A1P43005 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC1A1P43005 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.27■□□□□ 0.83
SLC1A1P43005 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
SLC1A1P43005 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.83
SLC1A1P43005 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC1A1P43005 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC1A1P43005 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC1A1P43005 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC1A1P43005 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC1A1P43005 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.26■□□□□ 0.83
SLC1A1P43005 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC1A1P43005 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC1A1P43005 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
SLC1A1P43005 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.26■□□□□ 0.83
SLC1A1P43005 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.26■□□□□ 0.83
SLC1A1P43005 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SLC1A1P43005 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SLC1A1P43005 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
SLC1A1P43005 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SLC1A1P43005 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC1A1P43005 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SLC1A1P43005 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC1A1P43005 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SLC1A1P43005 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.26■□□□□ 0.83
SLC1A1P43005 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC1A1P43005 AC142086.2-201ENST00000569753 217 ntBASIC20.26■□□□□ 0.83
SLC1A1P43005 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.26■□□□□ 0.83
SLC1A1P43005 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
SLC1A1P43005 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms