Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GRIK1P39086 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
GRIK1P39086 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
GRIK1P39086 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GRIK1P39086 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
GRIK1P39086 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GRIK1P39086 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GRIK1P39086 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
GRIK1P39086 AC004951.3-201ENST00000418645 1148 ntBASIC20.45■□□□□ 0.86
GRIK1P39086 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.45■□□□□ 0.86
GRIK1P39086 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.45■□□□□ 0.86
GRIK1P39086 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
GRIK1P39086 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.45■□□□□ 0.86
GRIK1P39086 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
GRIK1P39086 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.45■□□□□ 0.86
GRIK1P39086 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.45■□□□□ 0.86
GRIK1P39086 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.45■□□□□ 0.86
GRIK1P39086 AC130371.2-201ENST00000619443 611 ntBASIC20.45■□□□□ 0.86
GRIK1P39086 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.45■□□□□ 0.86
GRIK1P39086 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GRIK1P39086 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
GRIK1P39086 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
GRIK1P39086 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.45■□□□□ 0.86
GRIK1P39086 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GRIK1P39086 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.45■□□□□ 0.86
GRIK1P39086 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.45■□□□□ 0.86
GRIK1P39086 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GRIK1P39086 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
GRIK1P39086 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
GRIK1P39086 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.44■□□□□ 0.86
GRIK1P39086 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
GRIK1P39086 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
GRIK1P39086 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.44■□□□□ 0.86
GRIK1P39086 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.44■□□□□ 0.86
GRIK1P39086 FITM1-202ENST00000559294 800 ntBASIC20.44■□□□□ 0.86
GRIK1P39086 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.44■□□□□ 0.86
GRIK1P39086 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
GRIK1P39086 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.44■□□□□ 0.86
GRIK1P39086 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GRIK1P39086 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
GRIK1P39086 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
GRIK1P39086 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GRIK1P39086 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GRIK1P39086 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.43■□□□□ 0.86
GRIK1P39086 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GRIK1P39086 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.43■□□□□ 0.86
GRIK1P39086 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
GRIK1P39086 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
GRIK1P39086 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GRIK1P39086 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.43■□□□□ 0.86
GRIK1P39086 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.43■□□□□ 0.86
GRIK1P39086 AC097488.1-201ENST00000507834 756 ntBASIC20.43■□□□□ 0.86
GRIK1P39086 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.43■□□□□ 0.86
GRIK1P39086 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
GRIK1P39086 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
GRIK1P39086 KRT8P9-201ENST00000558927 1449 ntBASIC20.43■□□□□ 0.86
GRIK1P39086 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
GRIK1P39086 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GRIK1P39086 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.43■□□□□ 0.86
GRIK1P39086 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GRIK1P39086 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.43■□□□□ 0.86
GRIK1P39086 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GRIK1P39086 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
GRIK1P39086 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
GRIK1P39086 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GRIK1P39086 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GRIK1P39086 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
GRIK1P39086 Z85996.1-201ENST00000494644 937 ntBASIC20.42■□□□□ 0.86
GRIK1P39086 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.42■□□□□ 0.86
GRIK1P39086 DGCR10-201ENST00000609839 495 ntBASIC20.42■□□□□ 0.86
GRIK1P39086 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.42■□□□□ 0.86
GRIK1P39086 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GRIK1P39086 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GRIK1P39086 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GRIK1P39086 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.42■□□□□ 0.86
GRIK1P39086 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
GRIK1P39086 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GRIK1P39086 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GRIK1P39086 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.42■□□□□ 0.86
GRIK1P39086 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.42■□□□□ 0.86
GRIK1P39086 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
GRIK1P39086 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
GRIK1P39086 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
GRIK1P39086 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.41■□□□□ 0.86
GRIK1P39086 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
GRIK1P39086 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.41■□□□□ 0.86
GRIK1P39086 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
GRIK1P39086 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GRIK1P39086 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.41■□□□□ 0.86
GRIK1P39086 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GRIK1P39086 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.41■□□□□ 0.86
GRIK1P39086 CRYGFP-201ENST00000418459 633 ntBASIC20.41■□□□□ 0.86
GRIK1P39086 FAM207BP-201ENST00000447172 505 ntBASIC20.41■□□□□ 0.86
GRIK1P39086 AC008040.2-201ENST00000461049 708 ntBASIC20.41■□□□□ 0.86
GRIK1P39086 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
GRIK1P39086 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.41■□□□□ 0.86
GRIK1P39086 SLC25A1P4-201ENST00000567977 778 ntBASIC20.41■□□□□ 0.86
GRIK1P39086 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.41■□□□□ 0.86
GRIK1P39086 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.41■□□□□ 0.86
GRIK1P39086 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms