Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CSB-PGBD3P0DP91 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CSB-PGBD3P0DP91 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CSB-PGBD3P0DP91 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC25.73■■□□□ 1.71
CSB-PGBD3P0DP91 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
CSB-PGBD3P0DP91 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC25.73■■□□□ 1.71
CSB-PGBD3P0DP91 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC25.73■■□□□ 1.71
CSB-PGBD3P0DP91 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC25.73■■□□□ 1.71
CSB-PGBD3P0DP91 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC25.73■■□□□ 1.71
CSB-PGBD3P0DP91 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
CSB-PGBD3P0DP91 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC25.73■■□□□ 1.71
CSB-PGBD3P0DP91 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
CSB-PGBD3P0DP91 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CSB-PGBD3P0DP91 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CSB-PGBD3P0DP91 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC25.73■■□□□ 1.71
CSB-PGBD3P0DP91 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CSB-PGBD3P0DP91 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC25.73■■□□□ 1.71
CSB-PGBD3P0DP91 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CSB-PGBD3P0DP91 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC25.72■■□□□ 1.71
CSB-PGBD3P0DP91 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
CSB-PGBD3P0DP91 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC25.72■■□□□ 1.71
CSB-PGBD3P0DP91 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CSB-PGBD3P0DP91 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
CSB-PGBD3P0DP91 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
CSB-PGBD3P0DP91 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC25.72■■□□□ 1.71
CSB-PGBD3P0DP91 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
CSB-PGBD3P0DP91 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC25.72■■□□□ 1.71
CSB-PGBD3P0DP91 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
CSB-PGBD3P0DP91 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC25.72■■□□□ 1.71
CSB-PGBD3P0DP91 ZNF444P1-201ENST00000559497 298 ntBASIC25.72■■□□□ 1.71
CSB-PGBD3P0DP91 NT5C-210ENST00000582160 860 ntTSL 2 BASIC25.72■■□□□ 1.71
CSB-PGBD3P0DP91 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC25.72■■□□□ 1.71
CSB-PGBD3P0DP91 FEM1AP1-201ENST00000431297 1995 ntBASIC25.72■■□□□ 1.71
CSB-PGBD3P0DP91 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
CSB-PGBD3P0DP91 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC25.72■■□□□ 1.71
CSB-PGBD3P0DP91 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
CSB-PGBD3P0DP91 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CSB-PGBD3P0DP91 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CSB-PGBD3P0DP91 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CSB-PGBD3P0DP91 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC25.71■■□□□ 1.71
CSB-PGBD3P0DP91 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
CSB-PGBD3P0DP91 PHB2-202ENST00000440277 996 ntTSL 5 BASIC25.71■■□□□ 1.71
CSB-PGBD3P0DP91 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC25.71■■□□□ 1.71
CSB-PGBD3P0DP91 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC25.71■■□□□ 1.71
CSB-PGBD3P0DP91 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC25.71■■□□□ 1.71
CSB-PGBD3P0DP91 AC083849.1-201ENST00000615227 514 ntBASIC25.71■■□□□ 1.71
CSB-PGBD3P0DP91 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
CSB-PGBD3P0DP91 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CSB-PGBD3P0DP91 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC25.71■■□□□ 1.71
CSB-PGBD3P0DP91 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC25.7■■□□□ 1.71
CSB-PGBD3P0DP91 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
CSB-PGBD3P0DP91 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC25.7■■□□□ 1.71
CSB-PGBD3P0DP91 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CSB-PGBD3P0DP91 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC25.7■■□□□ 1.7
CSB-PGBD3P0DP91 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC25.7■■□□□ 1.7
CSB-PGBD3P0DP91 GCSHP2-201ENST00000560971 527 ntBASIC25.7■■□□□ 1.7
CSB-PGBD3P0DP91 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC25.7■■□□□ 1.7
CSB-PGBD3P0DP91 AC012313.10-201ENST00000623509 926 ntBASIC25.7■■□□□ 1.7
CSB-PGBD3P0DP91 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
CSB-PGBD3P0DP91 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC25.7■■□□□ 1.7
CSB-PGBD3P0DP91 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC25.7■■□□□ 1.7
CSB-PGBD3P0DP91 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC25.69■■□□□ 1.7
CSB-PGBD3P0DP91 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC25.69■■□□□ 1.7
CSB-PGBD3P0DP91 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC25.69■■□□□ 1.7
CSB-PGBD3P0DP91 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CSB-PGBD3P0DP91 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CSB-PGBD3P0DP91 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CSB-PGBD3P0DP91 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CSB-PGBD3P0DP91 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC25.69■■□□□ 1.7
CSB-PGBD3P0DP91 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
CSB-PGBD3P0DP91 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CSB-PGBD3P0DP91 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CSB-PGBD3P0DP91 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CSB-PGBD3P0DP91 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC25.69■■□□□ 1.7
CSB-PGBD3P0DP91 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC25.69■■□□□ 1.7
CSB-PGBD3P0DP91 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CSB-PGBD3P0DP91 LINC01311-201ENST00000565162 1445 ntBASIC25.69■■□□□ 1.7
CSB-PGBD3P0DP91 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
CSB-PGBD3P0DP91 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CSB-PGBD3P0DP91 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CSB-PGBD3P0DP91 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC25.69■■□□□ 1.7
CSB-PGBD3P0DP91 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
CSB-PGBD3P0DP91 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
CSB-PGBD3P0DP91 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CSB-PGBD3P0DP91 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC25.68■■□□□ 1.7
CSB-PGBD3P0DP91 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
CSB-PGBD3P0DP91 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC25.68■■□□□ 1.7
CSB-PGBD3P0DP91 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CSB-PGBD3P0DP91 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CSB-PGBD3P0DP91 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CSB-PGBD3P0DP91 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC25.68■■□□□ 1.7
CSB-PGBD3P0DP91 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC25.68■■□□□ 1.7
CSB-PGBD3P0DP91 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CSB-PGBD3P0DP91 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC25.68■■□□□ 1.7
CSB-PGBD3P0DP91 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
CSB-PGBD3P0DP91 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC25.68■■□□□ 1.7
CSB-PGBD3P0DP91 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
CSB-PGBD3P0DP91 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CSB-PGBD3P0DP91 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CSB-PGBD3P0DP91 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms