Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cops4O88544 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Cops4O88544 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cops4O88544 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.36■□□□□ 0.05
Cops4O88544 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cops4O88544 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.36■□□□□ 0.05
Cops4O88544 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.36■□□□□ 0.05
Cops4O88544 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cops4O88544 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cops4O88544 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cops4O88544 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cops4O88544 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cops4O88544 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cops4O88544 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Cops4O88544 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Cops4O88544 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC15.36■□□□□ 0.05
Cops4O88544 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.36■□□□□ 0.05
Cops4O88544 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cops4O88544 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cops4O88544 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cops4O88544 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cops4O88544 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cops4O88544 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cops4O88544 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cops4O88544 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
Cops4O88544 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cops4O88544 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cops4O88544 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.35■□□□□ 0.05
Cops4O88544 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cops4O88544 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.35■□□□□ 0.05
Cops4O88544 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cops4O88544 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cops4O88544 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cops4O88544 Gm12896-201ENSMUST00000118430 226 ntBASIC15.35■□□□□ 0.05
Cops4O88544 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC15.35■□□□□ 0.05
Cops4O88544 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cops4O88544 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cops4O88544 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Cops4O88544 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Cops4O88544 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC15.35■□□□□ 0.05
Cops4O88544 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.35■□□□□ 0.05
Cops4O88544 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cops4O88544 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cops4O88544 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cops4O88544 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cops4O88544 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cops4O88544 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Cops4O88544 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cops4O88544 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Cops4O88544 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cops4O88544 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cops4O88544 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cops4O88544 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cops4O88544 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cops4O88544 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cops4O88544 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cops4O88544 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cops4O88544 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Cops4O88544 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cops4O88544 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cops4O88544 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cops4O88544 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cops4O88544 Gm11643-201ENSMUST00000119578 864 ntBASIC15.34■□□□□ 0.05
Cops4O88544 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cops4O88544 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cops4O88544 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cops4O88544 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cops4O88544 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cops4O88544 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cops4O88544 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cops4O88544 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cops4O88544 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cops4O88544 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cops4O88544 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cops4O88544 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cops4O88544 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cops4O88544 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cops4O88544 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Cops4O88544 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
Cops4O88544 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cops4O88544 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cops4O88544 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cops4O88544 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.33■□□□□ 0.04
Cops4O88544 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cops4O88544 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC15.33■□□□□ 0.04
Cops4O88544 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.33■□□□□ 0.04
Cops4O88544 Gm10138-203ENSMUST00000206952 366 ntBASIC15.33■□□□□ 0.04
Cops4O88544 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.33■□□□□ 0.04
Cops4O88544 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cops4O88544 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cops4O88544 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cops4O88544 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cops4O88544 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cops4O88544 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cops4O88544 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cops4O88544 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cops4O88544 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cops4O88544 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cops4O88544 Dio3-201ENSMUST00000097228 1449 ntBASIC15.33■□□□□ 0.04
Cops4O88544 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms