Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
USH2AO75445 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
USH2AO75445 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
USH2AO75445 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
USH2AO75445 AC098831.1-202ENST00000438821 336 ntBASIC8.68□□□□□ -1.02
USH2AO75445 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC8.68□□□□□ -1.02
USH2AO75445 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC8.68□□□□□ -1.02
USH2AO75445 AC116351.2-201ENST00000606540 1585 ntBASIC8.68□□□□□ -1.02
USH2AO75445 KRT8P17-201ENST00000453110 1448 ntBASIC8.68□□□□□ -1.02
USH2AO75445 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
USH2AO75445 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC8.68□□□□□ -1.02
USH2AO75445 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
USH2AO75445 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
USH2AO75445 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
USH2AO75445 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC8.68□□□□□ -1.02
USH2AO75445 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
USH2AO75445 MIR7706-201ENST00000613747 67 ntBASIC8.68□□□□□ -1.02
USH2AO75445 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC8.68□□□□□ -1.02
USH2AO75445 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC8.68□□□□□ -1.02
USH2AO75445 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC8.68□□□□□ -1.02
USH2AO75445 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
USH2AO75445 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC8.68□□□□□ -1.02
USH2AO75445 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
USH2AO75445 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
USH2AO75445 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
USH2AO75445 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
USH2AO75445 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
USH2AO75445 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
USH2AO75445 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC8.68□□□□□ -1.02
USH2AO75445 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC8.68□□□□□ -1.02
USH2AO75445 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC8.68□□□□□ -1.02
USH2AO75445 AC239800.4-201ENST00000603712 296 ntBASIC8.68□□□□□ -1.02
USH2AO75445 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
USH2AO75445 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
USH2AO75445 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC8.68□□□□□ -1.02
USH2AO75445 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC8.67□□□□□ -1.02
USH2AO75445 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC8.67□□□□□ -1.02
USH2AO75445 AL049840.3-201ENST00000602669 611 ntBASIC8.67□□□□□ -1.02
USH2AO75445 AL121672.3-201ENST00000608644 468 ntBASIC8.67□□□□□ -1.02
USH2AO75445 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
USH2AO75445 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC8.67□□□□□ -1.02
USH2AO75445 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
USH2AO75445 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
USH2AO75445 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
USH2AO75445 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
USH2AO75445 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
USH2AO75445 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC8.67□□□□□ -1.02
USH2AO75445 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
USH2AO75445 DDT-203ENST00000403754 569 ntTSL 3 BASIC8.67□□□□□ -1.02
USH2AO75445 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC8.67□□□□□ -1.02
USH2AO75445 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC8.67□□□□□ -1.02
USH2AO75445 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
USH2AO75445 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC8.67□□□□□ -1.02
USH2AO75445 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
USH2AO75445 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
USH2AO75445 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
USH2AO75445 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
USH2AO75445 KRT8P41-201ENST00000533985 1514 ntBASIC8.67□□□□□ -1.02
USH2AO75445 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC8.67□□□□□ -1.02
USH2AO75445 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
USH2AO75445 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC8.67□□□□□ -1.02
USH2AO75445 SEC1P-202ENST00000473944 940 ntBASIC8.67□□□□□ -1.02
USH2AO75445 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
USH2AO75445 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC8.67□□□□□ -1.02
USH2AO75445 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC8.67□□□□□ -1.02
USH2AO75445 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
USH2AO75445 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC8.67□□□□□ -1.02
USH2AO75445 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
USH2AO75445 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC8.67□□□□□ -1.02
USH2AO75445 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
USH2AO75445 CCDC74BP1-201ENST00000508880 1123 ntBASIC8.67□□□□□ -1.02
USH2AO75445 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC8.67□□□□□ -1.02
USH2AO75445 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC8.67□□□□□ -1.02
USH2AO75445 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
USH2AO75445 AL157888.1-201ENST00000631930 593 ntBASIC8.67□□□□□ -1.02
USH2AO75445 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC8.67□□□□□ -1.02
USH2AO75445 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC8.67□□□□□ -1.02
USH2AO75445 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
USH2AO75445 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
USH2AO75445 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
USH2AO75445 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
USH2AO75445 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
USH2AO75445 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC8.67□□□□□ -1.02
USH2AO75445 FICD-205ENST00000552758 603 ntTSL 2 BASIC8.67□□□□□ -1.02
USH2AO75445 AC079602.3-201ENST00000623931 403 ntBASIC8.67□□□□□ -1.02
USH2AO75445 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
USH2AO75445 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
USH2AO75445 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
USH2AO75445 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
USH2AO75445 AC093525.10-201ENST00000625130 1569 ntBASIC8.66□□□□□ -1.02
USH2AO75445 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
USH2AO75445 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
USH2AO75445 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC8.66□□□□□ -1.02
USH2AO75445 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC8.66□□□□□ -1.02
USH2AO75445 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
USH2AO75445 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
USH2AO75445 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
USH2AO75445 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
USH2AO75445 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
USH2AO75445 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms