Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.06■□□□□ 0.96
EXTL3O43909 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
EXTL3O43909 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
EXTL3O43909 AC113410.3-201ENST00000623366 203 ntBASIC21.06■□□□□ 0.96
EXTL3O43909 CR392000.1-201ENST00000624770 1228 ntBASIC21.06■□□□□ 0.96
EXTL3O43909 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
EXTL3O43909 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
EXTL3O43909 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
EXTL3O43909 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
EXTL3O43909 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
EXTL3O43909 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21.06■□□□□ 0.96
EXTL3O43909 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
EXTL3O43909 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC21.06■□□□□ 0.96
EXTL3O43909 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.06■□□□□ 0.96
EXTL3O43909 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC21.05■□□□□ 0.96
EXTL3O43909 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.05■□□□□ 0.96
EXTL3O43909 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
EXTL3O43909 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
EXTL3O43909 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC21.05■□□□□ 0.96
EXTL3O43909 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC21.05■□□□□ 0.96
EXTL3O43909 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
EXTL3O43909 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.05■□□□□ 0.96
EXTL3O43909 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
EXTL3O43909 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
EXTL3O43909 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
EXTL3O43909 FAM197Y1-201ENST00000421178 764 ntBASIC21.05■□□□□ 0.96
EXTL3O43909 AC004980.1-204ENST00000429707 299 ntBASIC21.05■□□□□ 0.96
EXTL3O43909 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.05■□□□□ 0.96
EXTL3O43909 CD177P1-201ENST00000606252 935 ntBASIC21.05■□□□□ 0.96
EXTL3O43909 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC21.05■□□□□ 0.96
EXTL3O43909 AC131212.4-201ENST00000623606 975 ntBASIC21.05■□□□□ 0.96
EXTL3O43909 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC21.05■□□□□ 0.96
EXTL3O43909 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
EXTL3O43909 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
EXTL3O43909 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
EXTL3O43909 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
EXTL3O43909 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
EXTL3O43909 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EXTL3O43909 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EXTL3O43909 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
EXTL3O43909 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.04■□□□□ 0.96
EXTL3O43909 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC21.04■□□□□ 0.96
EXTL3O43909 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EXTL3O43909 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EXTL3O43909 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.04■□□□□ 0.96
EXTL3O43909 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EXTL3O43909 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.04■□□□□ 0.96
EXTL3O43909 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
EXTL3O43909 GRAP-204ENST00000573099 846 ntTSL 3 BASIC21.04■□□□□ 0.96
EXTL3O43909 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC21.04■□□□□ 0.96
EXTL3O43909 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.04■□□□□ 0.96
EXTL3O43909 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
EXTL3O43909 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
EXTL3O43909 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EXTL3O43909 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
EXTL3O43909 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EXTL3O43909 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
EXTL3O43909 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EXTL3O43909 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EXTL3O43909 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EXTL3O43909 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EXTL3O43909 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EXTL3O43909 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
EXTL3O43909 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EXTL3O43909 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.04■□□□□ 0.96
EXTL3O43909 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
EXTL3O43909 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.03■□□□□ 0.96
EXTL3O43909 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
EXTL3O43909 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
EXTL3O43909 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
EXTL3O43909 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
EXTL3O43909 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
EXTL3O43909 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
EXTL3O43909 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC21.03■□□□□ 0.96
EXTL3O43909 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC21.03■□□□□ 0.96
EXTL3O43909 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC21.03■□□□□ 0.96
EXTL3O43909 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC21.03■□□□□ 0.96
EXTL3O43909 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC21.03■□□□□ 0.96
EXTL3O43909 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
EXTL3O43909 ABBA01031674.1-201ENST00000635145 728 ntBASIC21.03■□□□□ 0.96
EXTL3O43909 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
EXTL3O43909 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
EXTL3O43909 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
EXTL3O43909 AC093484.2-201ENST00000580996 2166 ntBASIC21.03■□□□□ 0.96
EXTL3O43909 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
EXTL3O43909 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
EXTL3O43909 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
EXTL3O43909 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
EXTL3O43909 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
EXTL3O43909 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
EXTL3O43909 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
EXTL3O43909 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
EXTL3O43909 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
EXTL3O43909 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
EXTL3O43909 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
EXTL3O43909 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.02■□□□□ 0.96
EXTL3O43909 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
EXTL3O43909 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.02■□□□□ 0.96
EXTL3O43909 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21.02■□□□□ 0.96
EXTL3O43909 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms