Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
LOC102724428A0A0B4J2F2 MIR4674-201ENST00000582457 87 ntBASIC24.74■■□□□ 1.55
LOC102724428A0A0B4J2F2 NPAP1P7-201ENST00000613027 823 ntBASIC24.74■■□□□ 1.55
LOC102724428A0A0B4J2F2 IRF5-214ENST00000613821 595 ntTSL 5 BASIC24.74■■□□□ 1.55
LOC102724428A0A0B4J2F2 BCL10-202ENST00000620248 774 ntTSL 5 BASIC24.74■■□□□ 1.55
LOC102724428A0A0B4J2F2 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC24.74■■□□□ 1.55
LOC102724428A0A0B4J2F2 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC24.74■■□□□ 1.55
LOC102724428A0A0B4J2F2 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
LOC102724428A0A0B4J2F2 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
LOC102724428A0A0B4J2F2 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
LOC102724428A0A0B4J2F2 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
LOC102724428A0A0B4J2F2 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
LOC102724428A0A0B4J2F2 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC24.73■■□□□ 1.55
LOC102724428A0A0B4J2F2 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC24.73■■□□□ 1.55
LOC102724428A0A0B4J2F2 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
LOC102724428A0A0B4J2F2 TSPY21P-201ENST00000433481 731 ntBASIC24.73■■□□□ 1.55
LOC102724428A0A0B4J2F2 TSPY23P-201ENST00000440136 739 ntBASIC24.73■■□□□ 1.55
LOC102724428A0A0B4J2F2 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
LOC102724428A0A0B4J2F2 FGF14-AS2-201ENST00000606448 1074 ntBASIC24.73■■□□□ 1.55
LOC102724428A0A0B4J2F2 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
LOC102724428A0A0B4J2F2 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
LOC102724428A0A0B4J2F2 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC24.73■■□□□ 1.55
LOC102724428A0A0B4J2F2 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
LOC102724428A0A0B4J2F2 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
LOC102724428A0A0B4J2F2 GOLGA2P11-201ENST00000562660 1621 ntBASIC24.72■■□□□ 1.55
LOC102724428A0A0B4J2F2 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC24.72■■□□□ 1.55
LOC102724428A0A0B4J2F2 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
LOC102724428A0A0B4J2F2 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
LOC102724428A0A0B4J2F2 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
LOC102724428A0A0B4J2F2 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC24.72■■□□□ 1.55
LOC102724428A0A0B4J2F2 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC24.72■■□□□ 1.55
LOC102724428A0A0B4J2F2 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC24.72■■□□□ 1.55
LOC102724428A0A0B4J2F2 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC24.72■■□□□ 1.55
LOC102724428A0A0B4J2F2 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
LOC102724428A0A0B4J2F2 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
LOC102724428A0A0B4J2F2 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
LOC102724428A0A0B4J2F2 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
LOC102724428A0A0B4J2F2 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC24.72■■□□□ 1.55
LOC102724428A0A0B4J2F2 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
LOC102724428A0A0B4J2F2 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC24.71■■□□□ 1.55
LOC102724428A0A0B4J2F2 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
LOC102724428A0A0B4J2F2 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
LOC102724428A0A0B4J2F2 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC24.71■■□□□ 1.55
LOC102724428A0A0B4J2F2 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC24.71■■□□□ 1.55
LOC102724428A0A0B4J2F2 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC24.71■■□□□ 1.55
LOC102724428A0A0B4J2F2 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
LOC102724428A0A0B4J2F2 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
LOC102724428A0A0B4J2F2 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
LOC102724428A0A0B4J2F2 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC24.71■■□□□ 1.55
LOC102724428A0A0B4J2F2 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC24.71■■□□□ 1.55
LOC102724428A0A0B4J2F2 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
LOC102724428A0A0B4J2F2 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
LOC102724428A0A0B4J2F2 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
LOC102724428A0A0B4J2F2 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.55
LOC102724428A0A0B4J2F2 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
LOC102724428A0A0B4J2F2 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
LOC102724428A0A0B4J2F2 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
LOC102724428A0A0B4J2F2 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC24.7■■□□□ 1.55
LOC102724428A0A0B4J2F2 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC24.7■■□□□ 1.54
LOC102724428A0A0B4J2F2 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
LOC102724428A0A0B4J2F2 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
LOC102724428A0A0B4J2F2 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
LOC102724428A0A0B4J2F2 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
LOC102724428A0A0B4J2F2 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
LOC102724428A0A0B4J2F2 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC24.7■■□□□ 1.54
LOC102724428A0A0B4J2F2 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
LOC102724428A0A0B4J2F2 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
LOC102724428A0A0B4J2F2 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC24.7■■□□□ 1.54
LOC102724428A0A0B4J2F2 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
LOC102724428A0A0B4J2F2 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC24.7■■□□□ 1.54
LOC102724428A0A0B4J2F2 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
LOC102724428A0A0B4J2F2 ME2-216ENST00000639850 2331 ntTSL 5 BASIC24.7■■□□□ 1.54
LOC102724428A0A0B4J2F2 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.54
LOC102724428A0A0B4J2F2 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC24.7■■□□□ 1.54
LOC102724428A0A0B4J2F2 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
LOC102724428A0A0B4J2F2 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC24.7■■□□□ 1.54
LOC102724428A0A0B4J2F2 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
LOC102724428A0A0B4J2F2 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC24.69■■□□□ 1.54
LOC102724428A0A0B4J2F2 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
LOC102724428A0A0B4J2F2 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
LOC102724428A0A0B4J2F2 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
LOC102724428A0A0B4J2F2 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC24.69■■□□□ 1.54
LOC102724428A0A0B4J2F2 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC24.69■■□□□ 1.54
LOC102724428A0A0B4J2F2 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
LOC102724428A0A0B4J2F2 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
LOC102724428A0A0B4J2F2 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC24.69■■□□□ 1.54
LOC102724428A0A0B4J2F2 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC24.69■■□□□ 1.54
LOC102724428A0A0B4J2F2 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
LOC102724428A0A0B4J2F2 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC24.69■■□□□ 1.54
LOC102724428A0A0B4J2F2 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
LOC102724428A0A0B4J2F2 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC24.68■■□□□ 1.54
LOC102724428A0A0B4J2F2 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC24.68■■□□□ 1.54
LOC102724428A0A0B4J2F2 TBC1D3P2-202ENST00000577902 1649 ntBASIC24.68■■□□□ 1.54
LOC102724428A0A0B4J2F2 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC24.68■■□□□ 1.54
LOC102724428A0A0B4J2F2 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
LOC102724428A0A0B4J2F2 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
LOC102724428A0A0B4J2F2 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC24.68■■□□□ 1.54
LOC102724428A0A0B4J2F2 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
LOC102724428A0A0B4J2F2 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC24.68■■□□□ 1.54
LOC102724428A0A0B4J2F2 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms