Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 SAR1AP2-201ENST00000392696 594 ntBASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 SLC9B1P4-201ENST00000421957 1288 ntBASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 GOT2P5-201ENST00000433995 546 ntBASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 AC097523.2-201ENST00000435551 652 ntBASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 AL627308.1-201ENST00000435693 821 ntBASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 CYCSP12-201ENST00000437729 300 ntBASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 HIGD1AP11-201ENST00000438361 280 ntBASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 FAM177B-204ENST00000445590 1096 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 RPS17P13-201ENST00000448974 407 ntBASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 AC234781.3-201ENST00000452540 973 ntBASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 RPS15AP1-201ENST00000457423 391 ntBASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 AC146507.2-201ENST00000460608 476 ntBASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 RN7SL608P-201ENST00000492377 279 ntBASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 RNA5SP438-201ENST00000516561 112 ntBASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 RNA5SP340-201ENST00000517132 107 ntBASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 AC100849.2-201ENST00000518324 519 ntTSL 2 BASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 AC013701.1-201ENST00000522657 465 ntBASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 AP003122.2-201ENST00000527332 486 ntTSL 3 BASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 SYF2P1-201ENST00000550658 413 ntBASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 AC090877.1-201ENST00000561418 344 ntBASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 AC026826.3-201ENST00000561747 158 ntBASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 AC015720.2-201ENST00000567709 334 ntBASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 AC010653.1-201ENST00000571108 881 ntBASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 LLPHP1-201ENST00000603571 367 ntBASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 AL592504.1-201ENST00000605319 439 ntBASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 AL021997.2-201ENST00000615674 271 ntBASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 RN7SL820P-201ENST00000616437 299 ntBASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 MIR6891-201ENST00000618788 93 ntBASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 AC007546.1-201ENST00000619452 559 ntBASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 AC089999.3-201ENST00000622440 577 ntBASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 DLST-216ENST00000626051 252 ntTSL 5 BASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 AC006453.3-201ENST00000635891 377 ntBASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 LINC01808-202ENST00000641680 1116 ntBASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 AC110774.1-201ENST00000623567 2018 ntBASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 AC099654.2-201ENST00000433031 1980 ntBASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 AC007823.1-201ENST00000569932 1566 ntBASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 AC004972.1-201ENST00000623934 2209 ntBASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
LINC01558Q9Y6Z2 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
LINC01558Q9Y6Z2 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2□□□□□ -2.09
LINC01558Q9Y6Z2 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
LINC01558Q9Y6Z2 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
LINC01558Q9Y6Z2 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC2□□□□□ -2.09
LINC01558Q9Y6Z2 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC2□□□□□ -2.09
LINC01558Q9Y6Z2 SNORD56.3-201ENST00000363507 71 ntBASIC2□□□□□ -2.09
LINC01558Q9Y6Z2 RNA5SP175-201ENST00000364275 119 ntBASIC2□□□□□ -2.09
LINC01558Q9Y6Z2 RNA5SP235-201ENST00000365411 114 ntBASIC2□□□□□ -2.09
LINC01558Q9Y6Z2 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2□□□□□ -2.09
LINC01558Q9Y6Z2 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC2□□□□□ -2.09
LINC01558Q9Y6Z2 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC2□□□□□ -2.09
LINC01558Q9Y6Z2 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC2□□□□□ -2.09
LINC01558Q9Y6Z2 SNORA67-201ENST00000384423 137 ntBASIC2□□□□□ -2.09
LINC01558Q9Y6Z2 MIR128-2-201ENST00000384893 84 ntBASIC2□□□□□ -2.09
LINC01558Q9Y6Z2 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC2□□□□□ -2.09
LINC01558Q9Y6Z2 GABARAPL3-201ENST00000412799 354 ntBASIC2□□□□□ -2.09
LINC01558Q9Y6Z2 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC2□□□□□ -2.09
LINC01558Q9Y6Z2 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2□□□□□ -2.09
LINC01558Q9Y6Z2 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC2□□□□□ -2.09
LINC01558Q9Y6Z2 AL133325.1-201ENST00000421090 382 ntBASIC2□□□□□ -2.09
LINC01558Q9Y6Z2 IPPKP1-201ENST00000422501 768 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms