Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 AC008837.1-201ENST00000511513 412 ntBASIC4.85□□□□□ -1.63
RAI2Q9Y5P3 AC119751.5-201ENST00000514077 770 ntBASIC4.85□□□□□ -1.63
RAI2Q9Y5P3 SCARNA13-201ENST00000516672 275 ntBASIC4.85□□□□□ -1.63
RAI2Q9Y5P3 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.85□□□□□ -1.63
RAI2Q9Y5P3 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.85□□□□□ -1.63
RAI2Q9Y5P3 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC4.85□□□□□ -1.63
RAI2Q9Y5P3 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.85□□□□□ -1.63
RAI2Q9Y5P3 AP001880.2-201ENST00000538233 448 ntBASIC4.85□□□□□ -1.63
RAI2Q9Y5P3 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.85□□□□□ -1.63
RAI2Q9Y5P3 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.85□□□□□ -1.63
RAI2Q9Y5P3 RN7SL802P-201ENST00000577858 299 ntBASIC4.85□□□□□ -1.63
RAI2Q9Y5P3 MIR5699-201ENST00000578903 90 ntBASIC4.85□□□□□ -1.63
RAI2Q9Y5P3 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC4.85□□□□□ -1.63
RAI2Q9Y5P3 AC068790.7-201ENST00000602347 528 ntBASIC4.85□□□□□ -1.63
RAI2Q9Y5P3 GAS5-AS1-201ENST00000602767 694 ntBASIC4.85□□□□□ -1.63
RAI2Q9Y5P3 AC231759.1-201ENST00000616455 597 ntBASIC4.85□□□□□ -1.63
RAI2Q9Y5P3 AC015914.2-201ENST00000618167 288 ntBASIC4.85□□□□□ -1.63
RAI2Q9Y5P3 AC024023.1-201ENST00000624530 922 ntBASIC4.85□□□□□ -1.63
RAI2Q9Y5P3 AL133268.1-201ENST00000405676 1401 ntBASIC4.85□□□□□ -1.63
RAI2Q9Y5P3 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.85□□□□□ -1.63
RAI2Q9Y5P3 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
RAI2Q9Y5P3 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
RAI2Q9Y5P3 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RAI2Q9Y5P3 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
RAI2Q9Y5P3 MAPK10-263ENST00000641052 4307 ntBASIC4.84□□□□□ -1.63
RAI2Q9Y5P3 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RAI2Q9Y5P3 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.84□□□□□ -1.63
RAI2Q9Y5P3 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RAI2Q9Y5P3 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.84□□□□□ -1.63
RAI2Q9Y5P3 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RAI2Q9Y5P3 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
RAI2Q9Y5P3 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
RAI2Q9Y5P3 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
RAI2Q9Y5P3 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.84□□□□□ -1.63
RAI2Q9Y5P3 RNU4-68P-201ENST00000364314 141 ntBASIC4.84□□□□□ -1.63
RAI2Q9Y5P3 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
RAI2Q9Y5P3 RPL22P18-201ENST00000417197 377 ntBASIC4.84□□□□□ -1.63
RAI2Q9Y5P3 AC010099.3-201ENST00000423896 409 ntBASIC4.84□□□□□ -1.63
RAI2Q9Y5P3 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.84□□□□□ -1.63
RAI2Q9Y5P3 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.84□□□□□ -1.63
RAI2Q9Y5P3 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.84□□□□□ -1.63
RAI2Q9Y5P3 AL359073.1-201ENST00000448036 403 ntBASIC4.84□□□□□ -1.63
RAI2Q9Y5P3 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC4.84□□□□□ -1.63
RAI2Q9Y5P3 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RAI2Q9Y5P3 AC069304.1-201ENST00000491593 704 ntBASIC4.84□□□□□ -1.63
RAI2Q9Y5P3 AC023424.1-201ENST00000496058 459 ntBASIC4.84□□□□□ -1.63
RAI2Q9Y5P3 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.84□□□□□ -1.63
RAI2Q9Y5P3 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.84□□□□□ -1.63
RAI2Q9Y5P3 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RAI2Q9Y5P3 RNA5SP303-201ENST00000516192 130 ntBASIC4.84□□□□□ -1.63
RAI2Q9Y5P3 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.84□□□□□ -1.63
RAI2Q9Y5P3 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.84□□□□□ -1.63
RAI2Q9Y5P3 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.84□□□□□ -1.63
RAI2Q9Y5P3 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.84□□□□□ -1.63
RAI2Q9Y5P3 MTATP6P15-201ENST00000527233 835 ntBASIC4.84□□□□□ -1.63
RAI2Q9Y5P3 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RAI2Q9Y5P3 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.84□□□□□ -1.63
RAI2Q9Y5P3 AC087897.1-201ENST00000550134 156 ntBASIC4.84□□□□□ -1.63
RAI2Q9Y5P3 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC4.84□□□□□ -1.63
RAI2Q9Y5P3 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.84□□□□□ -1.63
RAI2Q9Y5P3 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RAI2Q9Y5P3 AL049844.2-201ENST00000604280 628 ntBASIC4.84□□□□□ -1.63
RAI2Q9Y5P3 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.84□□□□□ -1.63
RAI2Q9Y5P3 AC024941.1-201ENST00000612250 334 ntBASIC4.84□□□□□ -1.63
RAI2Q9Y5P3 OR8G7P-201ENST00000616658 848 ntBASIC4.84□□□□□ -1.63
RAI2Q9Y5P3 AC073569.3-201ENST00000619055 682 ntBASIC4.84□□□□□ -1.63
RAI2Q9Y5P3 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.84□□□□□ -1.63
RAI2Q9Y5P3 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.84□□□□□ -1.63
RAI2Q9Y5P3 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
RAI2Q9Y5P3 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
RAI2Q9Y5P3 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.84□□□□□ -1.64
RAI2Q9Y5P3 AC107068.1-201ENST00000563286 4218 ntBASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 AC097063.1-201ENST00000426714 1797 ntBASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 AL034370.1-201ENST00000397254 1590 ntBASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 RNU4-7P-201ENST00000364758 141 ntBASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 SNORD116-12-201ENST00000384468 92 ntBASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 RNU6-932P-201ENST00000391108 106 ntBASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 AC010385.1-201ENST00000412374 256 ntBASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 AL121878.1-201ENST00000418638 859 ntBASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 MTCO3P4-201ENST00000419236 787 ntBASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 OR2X1P-201ENST00000421144 687 ntBASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 RPS27AP7-201ENST00000422792 455 ntBASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 NRBF2P3-201ENST00000432731 865 ntBASIC4.83□□□□□ -1.64
RAI2Q9Y5P3 SETP8-201ENST00000435341 628 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms