Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHGA1Q9Y5H4 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.57□□□□□ -1.68
PCDHGA1Q9Y5H4 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.56□□□□□ -1.68
PCDHGA1Q9Y5H4 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.56□□□□□ -1.68
PCDHGA1Q9Y5H4 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHGA1Q9Y5H4 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHGA1Q9Y5H4 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.56□□□□□ -1.68
PCDHGA1Q9Y5H4 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
PCDHGA1Q9Y5H4 AP000542.2-201ENST00000623199 6179 ntBASIC4.56□□□□□ -1.68
PCDHGA1Q9Y5H4 RNU6-650P-201ENST00000365658 111 ntBASIC4.56□□□□□ -1.68
PCDHGA1Q9Y5H4 OR6K3-202ENST00000368146 996 ntBASIC4.56□□□□□ -1.68
PCDHGA1Q9Y5H4 SNORA70C-201ENST00000384538 135 ntBASIC4.56□□□□□ -1.68
PCDHGA1Q9Y5H4 Z98745.1-201ENST00000402553 494 ntBASIC4.56□□□□□ -1.68
PCDHGA1Q9Y5H4 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.56□□□□□ -1.68
PCDHGA1Q9Y5H4 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.56□□□□□ -1.68
PCDHGA1Q9Y5H4 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.56□□□□□ -1.68
PCDHGA1Q9Y5H4 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHGA1Q9Y5H4 AL121882.1-201ENST00000422893 417 ntBASIC4.56□□□□□ -1.68
PCDHGA1Q9Y5H4 RPL30P3-201ENST00000424262 333 ntBASIC4.56□□□□□ -1.68
PCDHGA1Q9Y5H4 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.56□□□□□ -1.68
PCDHGA1Q9Y5H4 AL031736.2-201ENST00000426573 787 ntBASIC4.56□□□□□ -1.68
PCDHGA1Q9Y5H4 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.56□□□□□ -1.68
PCDHGA1Q9Y5H4 CBX1P1-201ENST00000440184 427 ntBASIC4.56□□□□□ -1.68
PCDHGA1Q9Y5H4 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHGA1Q9Y5H4 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.56□□□□□ -1.68
PCDHGA1Q9Y5H4 RN7SL303P-201ENST00000469773 251 ntBASIC4.56□□□□□ -1.68
PCDHGA1Q9Y5H4 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.56□□□□□ -1.68
PCDHGA1Q9Y5H4 RPL23AP71-201ENST00000470966 469 ntBASIC4.56□□□□□ -1.68
PCDHGA1Q9Y5H4 RWDD4P1-201ENST00000488019 565 ntBASIC4.56□□□□□ -1.68
PCDHGA1Q9Y5H4 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC4.56□□□□□ -1.68
PCDHGA1Q9Y5H4 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.56□□□□□ -1.68
PCDHGA1Q9Y5H4 AC007016.1-201ENST00000512110 244 ntBASIC4.56□□□□□ -1.68
PCDHGA1Q9Y5H4 RN7SKP82-201ENST00000516786 223 ntBASIC4.56□□□□□ -1.68
PCDHGA1Q9Y5H4 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.56□□□□□ -1.68
PCDHGA1Q9Y5H4 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC4.56□□□□□ -1.68
PCDHGA1Q9Y5H4 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.56□□□□□ -1.68
PCDHGA1Q9Y5H4 AC090948.1-201ENST00000607464 549 ntBASIC4.56□□□□□ -1.68
PCDHGA1Q9Y5H4 FRG1DP-201ENST00000635586 771 ntBASIC4.56□□□□□ -1.68
PCDHGA1Q9Y5H4 MIR6715B-201ENST00000637172 77 ntBASIC4.56□□□□□ -1.68
PCDHGA1Q9Y5H4 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHGA1Q9Y5H4 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.56□□□□□ -1.68
PCDHGA1Q9Y5H4 AC011447.7-201ENST00000624228 1590 ntBASIC4.56□□□□□ -1.68
PCDHGA1Q9Y5H4 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHGA1Q9Y5H4 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.56□□□□□ -1.68
PCDHGA1Q9Y5H4 MFSD8-242ENST00000641690 4199 ntBASIC4.56□□□□□ -1.68
PCDHGA1Q9Y5H4 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
PCDHGA1Q9Y5H4 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
PCDHGA1Q9Y5H4 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
PCDHGA1Q9Y5H4 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PCDHGA1Q9Y5H4 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
PCDHGA1Q9Y5H4 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PCDHGA1Q9Y5H4 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.55□□□□□ -1.68
PCDHGA1Q9Y5H4 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.55□□□□□ -1.68
PCDHGA1Q9Y5H4 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PCDHGA1Q9Y5H4 RNU6-252P-201ENST00000363232 107 ntBASIC4.55□□□□□ -1.68
PCDHGA1Q9Y5H4 RNU1-87P-201ENST00000363727 170 ntBASIC4.55□□□□□ -1.68
PCDHGA1Q9Y5H4 RNU6-1279P-201ENST00000383917 103 ntBASIC4.55□□□□□ -1.68
PCDHGA1Q9Y5H4 PTGES3P2-201ENST00000407942 482 ntBASIC4.55□□□□□ -1.68
PCDHGA1Q9Y5H4 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.55□□□□□ -1.68
PCDHGA1Q9Y5H4 AC007738.1-201ENST00000413892 348 ntBASIC4.55□□□□□ -1.68
PCDHGA1Q9Y5H4 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PCDHGA1Q9Y5H4 AL356387.2-201ENST00000422272 243 ntBASIC4.55□□□□□ -1.68
PCDHGA1Q9Y5H4 RWDD4P2-201ENST00000426392 563 ntBASIC4.55□□□□□ -1.68
PCDHGA1Q9Y5H4 AL451139.1-201ENST00000434718 346 ntBASIC4.55□□□□□ -1.68
PCDHGA1Q9Y5H4 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.55□□□□□ -1.68
PCDHGA1Q9Y5H4 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.55□□□□□ -1.68
PCDHGA1Q9Y5H4 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PCDHGA1Q9Y5H4 RPL7P32-201ENST00000457119 744 ntBASIC4.55□□□□□ -1.68
PCDHGA1Q9Y5H4 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.55□□□□□ -1.68
PCDHGA1Q9Y5H4 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.55□□□□□ -1.68
PCDHGA1Q9Y5H4 MTND4LP2-201ENST00000502312 285 ntBASIC4.55□□□□□ -1.68
PCDHGA1Q9Y5H4 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
PCDHGA1Q9Y5H4 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.55□□□□□ -1.68
PCDHGA1Q9Y5H4 AP000827.1-201ENST00000527814 258 ntBASIC4.55□□□□□ -1.68
PCDHGA1Q9Y5H4 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.55□□□□□ -1.68
PCDHGA1Q9Y5H4 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.55□□□□□ -1.68
PCDHGA1Q9Y5H4 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PCDHGA1Q9Y5H4 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.55□□□□□ -1.68
PCDHGA1Q9Y5H4 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.55□□□□□ -1.68
PCDHGA1Q9Y5H4 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.55□□□□□ -1.68
PCDHGA1Q9Y5H4 AC079148.1-201ENST00000565944 819 ntBASIC4.55□□□□□ -1.68
PCDHGA1Q9Y5H4 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.55□□□□□ -1.68
PCDHGA1Q9Y5H4 PCNAP1-202ENST00000595299 752 ntBASIC4.55□□□□□ -1.68
PCDHGA1Q9Y5H4 AC115621.1-201ENST00000604653 858 ntBASIC4.55□□□□□ -1.68
PCDHGA1Q9Y5H4 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.55□□□□□ -1.68
PCDHGA1Q9Y5H4 AC012409.3-201ENST00000611343 981 ntBASIC4.55□□□□□ -1.68
PCDHGA1Q9Y5H4 AC024941.1-201ENST00000612250 334 ntBASIC4.55□□□□□ -1.68
PCDHGA1Q9Y5H4 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PCDHGA1Q9Y5H4 AC097460.3-201ENST00000623099 442 ntBASIC4.55□□□□□ -1.68
PCDHGA1Q9Y5H4 AC000123.2-201ENST00000623124 461 ntBASIC4.55□□□□□ -1.68
PCDHGA1Q9Y5H4 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.55□□□□□ -1.68
PCDHGA1Q9Y5H4 AP000720.1-201ENST00000625091 483 ntBASIC4.55□□□□□ -1.68
PCDHGA1Q9Y5H4 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PCDHGA1Q9Y5H4 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PCDHGA1Q9Y5H4 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PCDHGA1Q9Y5H4 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
PCDHGA1Q9Y5H4 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
PCDHGA1Q9Y5H4 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PCDHGA1Q9Y5H4 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
PCDHGA1Q9Y5H4 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms