Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 RN7SL518P-201ENST00000491887 280 ntBASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 RN7SL187P-201ENST00000495587 303 ntBASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 AC087752.2-201ENST00000521219 281 ntBASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 AC107952.1-201ENST00000524200 376 ntBASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 AL355836.1-201ENST00000555951 870 ntBASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 AP001330.4-201ENST00000604350 154 ntBASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 AC021646.1-201ENST00000605469 484 ntBASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 AL391813.2-201ENST00000609113 322 ntBASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 AL352984.2-202ENST00000613699 155 ntBASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 MIR6737-201ENST00000617385 70 ntBASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 OR1N1-202ENST00000619659 939 ntBASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 AC040168.1-201ENST00000623594 991 ntBASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 AC140479.4-205ENST00000636339 820 ntBASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 AC243725.1-201ENST00000637164 436 ntBASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 Z93022.1-201ENST00000433228 1554 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 AC007159.1-201ENST00000566529 4706 ntBASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 GMFG-201ENST00000253054 616 ntTSL 5 BASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 OR5P1P-201ENST00000299512 925 ntBASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 OR2M1P-201ENST00000318104 951 ntBASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 MIR369-201ENST00000362155 70 ntBASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 Y_RNA.231-201ENST00000364358 102 ntBASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 RNU6-463P-201ENST00000384340 107 ntBASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 RPL5P18-201ENST00000406671 891 ntBASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 CYCSP17-201ENST00000407870 315 ntBASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 SNORA11D-201ENST00000408548 128 ntBASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 SNORA11E-201ENST00000408778 128 ntBASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 AL713922.1-201ENST00000416477 747 ntBASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 AL663061.1-201ENST00000416625 580 ntBASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 EIF4A1P2-201ENST00000422633 1220 ntBASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 FDPSP6-201ENST00000425091 512 ntBASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 MTND3P16-201ENST00000452205 344 ntBASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 AC114797.1-201ENST00000514003 728 ntBASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 RNU4-29P-201ENST00000515943 174 ntBASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 RNA5SP318-201ENST00000516352 92 ntBASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 AC093012.1-202ENST00000549403 582 ntBASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 FAM30C-201ENST00000561158 410 ntBASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 FRG2DP-202ENST00000566967 323 ntBASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 MIR3146-201ENST00000580367 79 ntBASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 AC067852.5-201ENST00000589299 310 ntBASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 DPPA3P3-201ENST00000603842 430 ntBASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 AL035410.2-201ENST00000604963 864 ntBASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 AL355816.1-201ENST00000607951 118 ntBASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 AC103710.3-201ENST00000608157 948 ntBASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 AL158196.1-201ENST00000616786 434 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms