Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.79
RHBDD3Q9Y3P4 MTND4P31-201ENST00000425607 1343 ntBASIC3.84□□□□□ -1.79
RHBDD3Q9Y3P4 AC106871.1-201ENST00000568324 3102 ntBASIC3.84□□□□□ -1.79
RHBDD3Q9Y3P4 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC3.84□□□□□ -1.79
RHBDD3Q9Y3P4 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
RHBDD3Q9Y3P4 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
RHBDD3Q9Y3P4 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.83□□□□□ -1.8
RHBDD3Q9Y3P4 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RHBDD3Q9Y3P4 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
RHBDD3Q9Y3P4 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
RHBDD3Q9Y3P4 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
RHBDD3Q9Y3P4 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
RHBDD3Q9Y3P4 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
RHBDD3Q9Y3P4 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
RHBDD3Q9Y3P4 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
RHBDD3Q9Y3P4 AC007685.1-201ENST00000329806 452 ntBASIC3.83□□□□□ -1.8
RHBDD3Q9Y3P4 RNU1-15P-201ENST00000353977 144 ntBASIC3.83□□□□□ -1.8
RHBDD3Q9Y3P4 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
RHBDD3Q9Y3P4 SNORA70F-201ENST00000384142 135 ntBASIC3.83□□□□□ -1.8
RHBDD3Q9Y3P4 MIR3074-201ENST00000384885 81 ntBASIC3.83□□□□□ -1.8
RHBDD3Q9Y3P4 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RHBDD3Q9Y3P4 CCNB2P1-201ENST00000399411 1150 ntBASIC3.83□□□□□ -1.8
RHBDD3Q9Y3P4 AL133270.1-201ENST00000402635 279 ntBASIC3.83□□□□□ -1.8
RHBDD3Q9Y3P4 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RHBDD3Q9Y3P4 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC3.83□□□□□ -1.8
RHBDD3Q9Y3P4 PRELID3BP11-201ENST00000414230 479 ntBASIC3.83□□□□□ -1.8
RHBDD3Q9Y3P4 AC073335.1-201ENST00000427776 363 ntBASIC3.83□□□□□ -1.8
RHBDD3Q9Y3P4 BRWD1P3-201ENST00000428816 390 ntBASIC3.83□□□□□ -1.8
RHBDD3Q9Y3P4 ACTR3P2-201ENST00000439585 1257 ntBASIC3.83□□□□□ -1.8
RHBDD3Q9Y3P4 AC011753.3-201ENST00000443436 406 ntBASIC3.83□□□□□ -1.8
RHBDD3Q9Y3P4 AL162591.2-201ENST00000449634 317 ntBASIC3.83□□□□□ -1.8
RHBDD3Q9Y3P4 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC3.83□□□□□ -1.8
RHBDD3Q9Y3P4 RPL37P3-201ENST00000456825 293 ntBASIC3.83□□□□□ -1.8
RHBDD3Q9Y3P4 SEPT14P1-201ENST00000458703 648 ntBASIC3.83□□□□□ -1.8
RHBDD3Q9Y3P4 AC006499.6-201ENST00000511169 607 ntBASIC3.83□□□□□ -1.8
RHBDD3Q9Y3P4 MYL12AP1-201ENST00000518490 515 ntBASIC3.83□□□□□ -1.8
RHBDD3Q9Y3P4 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RHBDD3Q9Y3P4 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC3.83□□□□□ -1.8
RHBDD3Q9Y3P4 TOMM20P2-201ENST00000540082 421 ntBASIC3.83□□□□□ -1.8
RHBDD3Q9Y3P4 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC3.83□□□□□ -1.8
RHBDD3Q9Y3P4 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.83□□□□□ -1.8
RHBDD3Q9Y3P4 AC069061.3-201ENST00000582254 823 ntBASIC3.83□□□□□ -1.8
RHBDD3Q9Y3P4 VN1R79P-201ENST00000593540 513 ntBASIC3.83□□□□□ -1.8
RHBDD3Q9Y3P4 MIMT1-201ENST00000597105 1050 ntBASIC3.83□□□□□ -1.8
RHBDD3Q9Y3P4 Mico1.1-201ENST00000611698 204 ntBASIC3.83□□□□□ -1.8
RHBDD3Q9Y3P4 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.83□□□□□ -1.8
RHBDD3Q9Y3P4 AC006065.6-201ENST00000625201 545 ntBASIC3.83□□□□□ -1.8
RHBDD3Q9Y3P4 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.83□□□□□ -1.8
RHBDD3Q9Y3P4 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RHBDD3Q9Y3P4 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.83□□□□□ -1.8
RHBDD3Q9Y3P4 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
RHBDD3Q9Y3P4 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
RHBDD3Q9Y3P4 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
RHBDD3Q9Y3P4 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RHBDD3Q9Y3P4 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RHBDD3Q9Y3P4 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
RHBDD3Q9Y3P4 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
RHBDD3Q9Y3P4 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
RHBDD3Q9Y3P4 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.82□□□□□ -1.8
RHBDD3Q9Y3P4 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
RHBDD3Q9Y3P4 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.82□□□□□ -1.8
RHBDD3Q9Y3P4 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RHBDD3Q9Y3P4 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RHBDD3Q9Y3P4 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.82□□□□□ -1.8
RHBDD3Q9Y3P4 AC103591.2-201ENST00000265259 766 ntBASIC3.82□□□□□ -1.8
RHBDD3Q9Y3P4 RHOT1P2-201ENST00000366423 333 ntBASIC3.82□□□□□ -1.8
RHBDD3Q9Y3P4 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RHBDD3Q9Y3P4 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.82□□□□□ -1.8
RHBDD3Q9Y3P4 RNU6-452P-201ENST00000384406 107 ntBASIC3.82□□□□□ -1.8
RHBDD3Q9Y3P4 GLULP6-201ENST00000399502 913 ntBASIC3.82□□□□□ -1.8
RHBDD3Q9Y3P4 AL139128.1-201ENST00000413921 941 ntBASIC3.82□□□□□ -1.8
RHBDD3Q9Y3P4 SNRPFP1-201ENST00000414761 252 ntBASIC3.82□□□□□ -1.8
RHBDD3Q9Y3P4 AC092832.1-201ENST00000422934 400 ntBASIC3.82□□□□□ -1.8
RHBDD3Q9Y3P4 ELOCP11-201ENST00000436690 332 ntBASIC3.82□□□□□ -1.8
RHBDD3Q9Y3P4 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC3.82□□□□□ -1.8
RHBDD3Q9Y3P4 ELOCP16-201ENST00000444494 332 ntBASIC3.82□□□□□ -1.8
RHBDD3Q9Y3P4 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC3.82□□□□□ -1.8
RHBDD3Q9Y3P4 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC3.82□□□□□ -1.8
RHBDD3Q9Y3P4 ABCF2P2-201ENST00000450549 296 ntBASIC3.82□□□□□ -1.8
RHBDD3Q9Y3P4 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.82□□□□□ -1.8
RHBDD3Q9Y3P4 VN1R32P-201ENST00000452234 905 ntBASIC3.82□□□□□ -1.8
RHBDD3Q9Y3P4 AC092691.2-201ENST00000461787 803 ntBASIC3.82□□□□□ -1.8
RHBDD3Q9Y3P4 AC010469.1-201ENST00000463864 576 ntBASIC3.82□□□□□ -1.8
RHBDD3Q9Y3P4 MTATP6P22-201ENST00000507369 598 ntBASIC3.82□□□□□ -1.8
RHBDD3Q9Y3P4 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.82□□□□□ -1.8
RHBDD3Q9Y3P4 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC3.82□□□□□ -1.8
RHBDD3Q9Y3P4 AC104997.1-201ENST00000519761 717 ntBASIC3.82□□□□□ -1.8
RHBDD3Q9Y3P4 IFITM8P-201ENST00000522529 394 ntBASIC3.82□□□□□ -1.8
RHBDD3Q9Y3P4 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.82□□□□□ -1.8
RHBDD3Q9Y3P4 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC3.82□□□□□ -1.8
RHBDD3Q9Y3P4 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC3.82□□□□□ -1.8
RHBDD3Q9Y3P4 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC3.82□□□□□ -1.8
RHBDD3Q9Y3P4 AP002812.4-201ENST00000532139 286 ntBASIC3.82□□□□□ -1.8
RHBDD3Q9Y3P4 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC3.82□□□□□ -1.8
RHBDD3Q9Y3P4 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC3.82□□□□□ -1.8
RHBDD3Q9Y3P4 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.82□□□□□ -1.8
RHBDD3Q9Y3P4 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC3.82□□□□□ -1.8
RHBDD3Q9Y3P4 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.82□□□□□ -1.8
RHBDD3Q9Y3P4 RNA5SP108-201ENST00000605921 117 ntBASIC3.82□□□□□ -1.8
RHBDD3Q9Y3P4 Z98200.1-201ENST00000607298 470 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms