Protein–RNA interactions for Protein: Q9UKS6

PACSIN3, Protein kinase C and casein kinase substrate in neurons protein 3, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3Q9UKS6 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 OR9G4-201ENST00000302957 984 ntBASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 RNU6-761P-201ENST00000384148 107 ntBASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 SNORA75-201ENST00000384158 137 ntBASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 OR3A2-201ENST00000408891 1076 ntBASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 CCDC58P2-201ENST00000417131 366 ntBASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 FNDC3CP-201ENST00000420795 1155 ntBASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 REREP1Y-201ENST00000422655 198 ntBASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 AL662874.1-201ENST00000426065 230 ntBASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 MTND3P23-201ENST00000431980 347 ntBASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 REREP2Y-201ENST00000439103 200 ntBASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 SNRPEP8-201ENST00000442866 260 ntBASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 EEF1B2P6-201ENST00000445713 673 ntBASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 AC073909.1-201ENST00000447112 999 ntBASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 RPL7P1-201ENST00000468161 747 ntBASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 RPL7P9-201ENST00000468715 747 ntBASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 BNIP3P41-201ENST00000503774 571 ntBASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 AC109471.1-201ENST00000511631 612 ntBASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 NPM1P21-201ENST00000513394 762 ntBASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 ATP5LP3-201ENST00000514223 304 ntBASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 snoZ278.1-201ENST00000517059 112 ntBASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 SNORA43.3-201ENST00000517240 103 ntBASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 AP003392.2-201ENST00000527269 208 ntBASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 AC124293.1-201ENST00000530034 493 ntBASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 DPPA2P4-201ENST00000563717 878 ntBASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 AC091805.2-201ENST00000603848 235 ntBASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 AC010857.1-201ENST00000606398 594 ntBASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 AC097505.1-201ENST00000610199 565 ntBASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 AC025253.1-201ENST00000613623 543 ntBASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 AC022467.1-201ENST00000614738 749 ntBASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 MIR6839-201ENST00000620425 113 ntBASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 AC010435.1-201ENST00000623353 1177 ntBASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 AC073869.10-201ENST00000642016 354 ntBASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 Z95331.1-201ENST00000623075 23112 ntBASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 TTC39DP-201ENST00000416781 1688 ntBASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.12□□□□□ -1.59
PACSIN3Q9UKS6 AC000374.1-201ENST00000434698 1745 ntBASIC5.11□□□□□ -1.59
PACSIN3Q9UKS6 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.11□□□□□ -1.59
PACSIN3Q9UKS6 AC000367.1-201ENST00000452711 1766 ntBASIC5.11□□□□□ -1.59
PACSIN3Q9UKS6 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PACSIN3Q9UKS6 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PACSIN3Q9UKS6 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
PACSIN3Q9UKS6 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.11□□□□□ -1.59
PACSIN3Q9UKS6 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
PACSIN3Q9UKS6 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
PACSIN3Q9UKS6 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PACSIN3Q9UKS6 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PACSIN3Q9UKS6 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
PACSIN3Q9UKS6 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.11□□□□□ -1.59
PACSIN3Q9UKS6 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
PACSIN3Q9UKS6 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PACSIN3Q9UKS6 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PACSIN3Q9UKS6 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PACSIN3Q9UKS6 DNAJC19P6-201ENST00000401853 280 ntBASIC5.11□□□□□ -1.59
PACSIN3Q9UKS6 AC010385.1-201ENST00000412374 256 ntBASIC5.11□□□□□ -1.59
PACSIN3Q9UKS6 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC5.11□□□□□ -1.59
PACSIN3Q9UKS6 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.11□□□□□ -1.59
PACSIN3Q9UKS6 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC5.11□□□□□ -1.59
PACSIN3Q9UKS6 AL139421.1-201ENST00000423010 169 ntBASIC5.11□□□□□ -1.59
PACSIN3Q9UKS6 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.11□□□□□ -1.59
PACSIN3Q9UKS6 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.11□□□□□ -1.59
PACSIN3Q9UKS6 ATP5F1P1-201ENST00000433775 569 ntBASIC5.11□□□□□ -1.59
PACSIN3Q9UKS6 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.11□□□□□ -1.59
PACSIN3Q9UKS6 RPL23AP76-201ENST00000441860 458 ntBASIC5.11□□□□□ -1.59
PACSIN3Q9UKS6 NOP56P2-201ENST00000447491 769 ntBASIC5.11□□□□□ -1.59
PACSIN3Q9UKS6 HMGB1P5-202ENST00000451497 985 ntBASIC5.11□□□□□ -1.59
PACSIN3Q9UKS6 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC5.11□□□□□ -1.59
PACSIN3Q9UKS6 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms