Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CHRNA9Q9UGM1 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC4.11□□□□□ -1.75
CHRNA9Q9UGM1 AC008759.1-201ENST00000589783 983 ntBASIC4.11□□□□□ -1.75
CHRNA9Q9UGM1 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.11□□□□□ -1.75
CHRNA9Q9UGM1 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.11□□□□□ -1.75
CHRNA9Q9UGM1 BNIP3P32-201ENST00000600015 554 ntBASIC4.11□□□□□ -1.75
CHRNA9Q9UGM1 AC135178.6-201ENST00000605314 398 ntBASIC4.11□□□□□ -1.75
CHRNA9Q9UGM1 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CHRNA9Q9UGM1 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.11□□□□□ -1.75
CHRNA9Q9UGM1 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.11□□□□□ -1.75
CHRNA9Q9UGM1 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CHRNA9Q9UGM1 AC091905.2-201ENST00000623143 306 ntBASIC4.11□□□□□ -1.75
CHRNA9Q9UGM1 AC083865.1-201ENST00000636634 831 ntBASIC4.11□□□□□ -1.75
CHRNA9Q9UGM1 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.11□□□□□ -1.75
CHRNA9Q9UGM1 AC009452.1-201ENST00000640823 606 ntBASIC4.11□□□□□ -1.75
CHRNA9Q9UGM1 DCAF13P3-201ENST00000561147 1334 ntBASIC4.11□□□□□ -1.75
CHRNA9Q9UGM1 ERCC6-202ENST00000374127 1782 ntBASIC4.11□□□□□ -1.75
CHRNA9Q9UGM1 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.11□□□□□ -1.75
CHRNA9Q9UGM1 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.11□□□□□ -1.75
CHRNA9Q9UGM1 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
CHRNA9Q9UGM1 ZNF33CP-201ENST00000432492 2030 ntBASIC4.11□□□□□ -1.75
CHRNA9Q9UGM1 AC017104.4-201ENST00000636283 1592 ntBASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 AC015813.6-201ENST00000624409 5808 ntBASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 OR4K15-201ENST00000305051 1216 ntBASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 RNVU1-6-201ENST00000364688 164 ntBASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 OR52E6-202ENST00000379946 954 ntBASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 RNU6-98P-201ENST00000384173 107 ntBASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 AL603766.1-201ENST00000407763 664 ntBASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 AL590139.1-201ENST00000416267 400 ntBASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 RAD23BP1-201ENST00000421404 1227 ntBASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 OR5AW1P-201ENST00000426334 1006 ntBASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 YY1P1-201ENST00000427625 668 ntBASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 ZFAND6P1-201ENST00000434138 605 ntBASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 RPL23AP93-201ENST00000440847 484 ntBASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 AL645939.1-201ENST00000453429 797 ntBASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 AC133473.1-201ENST00000455173 299 ntBASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 RN7SL354P-201ENST00000469282 294 ntBASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 AC008897.1-201ENST00000494006 347 ntBASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 HAUS1P3-201ENST00000523909 662 ntBASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 AC004923.2-201ENST00000529649 369 ntBASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 AP001781.1-201ENST00000530977 207 ntBASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 AC100770.1-201ENST00000532310 322 ntBASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 AP006289.1-201ENST00000538089 277 ntBASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 AC025918.2-201ENST00000558683 763 ntBASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 AC090181.2-201ENST00000602975 672 ntBASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 BPIFA4P-203ENST00000603168 689 ntBASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 AC010680.3-201ENST00000604215 520 ntBASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 AC010201.1-201ENST00000605051 540 ntBASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 AL133243.1-201ENST00000614487 366 ntBASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 AL158196.1-201ENST00000616786 434 ntBASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 LINC01808-202ENST00000641680 1116 ntBASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 AC105074.1-201ENST00000623380 3095 ntBASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 LINC00622-201ENST00000562811 1570 ntBASIC4.1□□□□□ -1.75
CHRNA9Q9UGM1 CPHL1P-201ENST00000461341 3407 ntBASIC4.09□□□□□ -1.75
CHRNA9Q9UGM1 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
CHRNA9Q9UGM1 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
CHRNA9Q9UGM1 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CHRNA9Q9UGM1 AC139769.1-204ENST00000472297 1931 ntBASIC4.09□□□□□ -1.75
CHRNA9Q9UGM1 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CHRNA9Q9UGM1 AC068254.2-201ENST00000623938 3577 ntBASIC4.09□□□□□ -1.75
CHRNA9Q9UGM1 AC103591.2-201ENST00000265259 766 ntBASIC4.09□□□□□ -1.75
CHRNA9Q9UGM1 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CHRNA9Q9UGM1 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CHRNA9Q9UGM1 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.09□□□□□ -1.75
CHRNA9Q9UGM1 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CHRNA9Q9UGM1 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.09□□□□□ -1.75
CHRNA9Q9UGM1 VTA1P1-201ENST00000414044 866 ntBASIC4.09□□□□□ -1.75
CHRNA9Q9UGM1 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.09□□□□□ -1.75
CHRNA9Q9UGM1 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.09□□□□□ -1.75
CHRNA9Q9UGM1 AC062016.2-201ENST00000420950 676 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms