Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CTSFQ9UBX1 MIR383-201ENST00000362257 73 ntBASIC4.1□□□□□ -1.75
CTSFQ9UBX1 RNU1-20P-201ENST00000363314 162 ntBASIC4.1□□□□□ -1.75
CTSFQ9UBX1 MIR93-201ENST00000385024 80 ntBASIC4.1□□□□□ -1.75
CTSFQ9UBX1 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.1□□□□□ -1.75
CTSFQ9UBX1 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.1□□□□□ -1.75
CTSFQ9UBX1 CEACAMP8-201ENST00000413902 580 ntBASIC4.1□□□□□ -1.75
CTSFQ9UBX1 MFSD13B-201ENST00000420133 1290 ntBASIC4.1□□□□□ -1.75
CTSFQ9UBX1 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.1□□□□□ -1.75
CTSFQ9UBX1 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.1□□□□□ -1.75
CTSFQ9UBX1 CDY14P-201ENST00000431260 1014 ntBASIC4.1□□□□□ -1.75
CTSFQ9UBX1 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.1□□□□□ -1.75
CTSFQ9UBX1 RPEP2-201ENST00000432149 701 ntBASIC4.1□□□□□ -1.75
CTSFQ9UBX1 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.1□□□□□ -1.75
CTSFQ9UBX1 CDY12P-201ENST00000440679 1015 ntBASIC4.1□□□□□ -1.75
CTSFQ9UBX1 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.1□□□□□ -1.75
CTSFQ9UBX1 CDY13P-201ENST00000445813 1015 ntBASIC4.1□□□□□ -1.75
CTSFQ9UBX1 CDY23P-201ENST00000451661 1014 ntBASIC4.1□□□□□ -1.75
CTSFQ9UBX1 AC005229.2-201ENST00000456995 399 ntBASIC4.1□□□□□ -1.75
CTSFQ9UBX1 RPL35AP15-201ENST00000468042 339 ntBASIC4.1□□□□□ -1.75
CTSFQ9UBX1 RN7SL812P-201ENST00000493791 279 ntBASIC4.1□□□□□ -1.75
CTSFQ9UBX1 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.1□□□□□ -1.75
CTSFQ9UBX1 PARP4P3-201ENST00000510265 317 ntBASIC4.1□□□□□ -1.75
CTSFQ9UBX1 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.1□□□□□ -1.75
CTSFQ9UBX1 SNORA31.9-201ENST00000516429 84 ntBASIC4.1□□□□□ -1.75
CTSFQ9UBX1 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.1□□□□□ -1.75
CTSFQ9UBX1 AC022790.1-201ENST00000522872 204 ntBASIC4.1□□□□□ -1.75
CTSFQ9UBX1 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.1□□□□□ -1.75
CTSFQ9UBX1 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.1□□□□□ -1.75
CTSFQ9UBX1 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.1□□□□□ -1.75
CTSFQ9UBX1 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.1□□□□□ -1.75
CTSFQ9UBX1 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC4.1□□□□□ -1.75
CTSFQ9UBX1 AC009303.3-201ENST00000591103 736 ntBASIC4.1□□□□□ -1.75
CTSFQ9UBX1 AL139286.1-201ENST00000604465 483 ntBASIC4.1□□□□□ -1.75
CTSFQ9UBX1 AC010201.1-201ENST00000605051 540 ntBASIC4.1□□□□□ -1.75
CTSFQ9UBX1 AC068831.8-201ENST00000620171 435 ntBASIC4.1□□□□□ -1.75
CTSFQ9UBX1 AC005086.4-201ENST00000623065 213 ntBASIC4.1□□□□□ -1.75
CTSFQ9UBX1 AC007546.2-201ENST00000623996 360 ntBASIC4.1□□□□□ -1.75
CTSFQ9UBX1 MIR3653-201ENST00000625572 110 ntBASIC4.1□□□□□ -1.75
CTSFQ9UBX1 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CTSFQ9UBX1 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CTSFQ9UBX1 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.1□□□□□ -1.75
CTSFQ9UBX1 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CTSFQ9UBX1 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
CTSFQ9UBX1 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CTSFQ9UBX1 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CTSFQ9UBX1 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CTSFQ9UBX1 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CTSFQ9UBX1 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CTSFQ9UBX1 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.09□□□□□ -1.75
CTSFQ9UBX1 GSTM3P2-201ENST00000412746 530 ntBASIC4.09□□□□□ -1.75
CTSFQ9UBX1 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.09□□□□□ -1.75
CTSFQ9UBX1 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CTSFQ9UBX1 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.09□□□□□ -1.75
CTSFQ9UBX1 VN1R32P-201ENST00000452234 905 ntBASIC4.09□□□□□ -1.75
CTSFQ9UBX1 AL161747.1-201ENST00000480068 358 ntBASIC4.09□□□□□ -1.75
CTSFQ9UBX1 AC011037.1-201ENST00000483964 558 ntBASIC4.09□□□□□ -1.75
CTSFQ9UBX1 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.09□□□□□ -1.75
CTSFQ9UBX1 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.09□□□□□ -1.75
CTSFQ9UBX1 AC025445.1-201ENST00000502728 300 ntBASIC4.09□□□□□ -1.75
CTSFQ9UBX1 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.09□□□□□ -1.75
CTSFQ9UBX1 AC008958.1-201ENST00000511047 682 ntBASIC4.09□□□□□ -1.75
CTSFQ9UBX1 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.09□□□□□ -1.75
CTSFQ9UBX1 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CTSFQ9UBX1 IGLVIV-53-201ENST00000520107 367 ntBASIC4.09□□□□□ -1.75
CTSFQ9UBX1 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.09□□□□□ -1.75
CTSFQ9UBX1 TRAV11-201ENST00000539512 339 ntBASIC4.09□□□□□ -1.75
CTSFQ9UBX1 TOMM20P2-201ENST00000540082 421 ntBASIC4.09□□□□□ -1.75
CTSFQ9UBX1 AC135001.1-201ENST00000544546 283 ntBASIC4.09□□□□□ -1.75
CTSFQ9UBX1 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CTSFQ9UBX1 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.09□□□□□ -1.75
CTSFQ9UBX1 AC027455.1-201ENST00000574104 594 ntBASIC4.09□□□□□ -1.75
CTSFQ9UBX1 OR1AB1P-201ENST00000585564 761 ntBASIC4.09□□□□□ -1.75
CTSFQ9UBX1 AC025175.1-201ENST00000606482 759 ntBASIC4.09□□□□□ -1.75
CTSFQ9UBX1 AL021997.2-201ENST00000615674 271 ntBASIC4.09□□□□□ -1.75
CTSFQ9UBX1 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CTSFQ9UBX1 AC016957.2-201ENST00000616998 848 ntBASIC4.09□□□□□ -1.75
CTSFQ9UBX1 AC074276.2-201ENST00000619891 348 ntBASIC4.09□□□□□ -1.75
CTSFQ9UBX1 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.09□□□□□ -1.75
CTSFQ9UBX1 AL445363.3-201ENST00000623080 671 ntBASIC4.09□□□□□ -1.75
CTSFQ9UBX1 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.09□□□□□ -1.75
CTSFQ9UBX1 FP325313.1-201ENST00000638228 703 ntBASIC4.09□□□□□ -1.75
CTSFQ9UBX1 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CTSFQ9UBX1 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CTSFQ9UBX1 AC005261.4-201ENST00000600047 1385 ntBASIC4.09□□□□□ -1.75
CTSFQ9UBX1 MFSD8-220ENST00000641243 1422 ntBASIC4.09□□□□□ -1.75
CTSFQ9UBX1 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CTSFQ9UBX1 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.09□□□□□ -1.75
CTSFQ9UBX1 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CTSFQ9UBX1 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.09□□□□□ -1.76
CTSFQ9UBX1 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CTSFQ9UBX1 AL121657.1-201ENST00000327215 531 ntBASIC4.08□□□□□ -1.76
CTSFQ9UBX1 RNA5SP52-201ENST00000362448 134 ntBASIC4.08□□□□□ -1.76
CTSFQ9UBX1 RNA5SP307-201ENST00000362863 116 ntBASIC4.08□□□□□ -1.76
CTSFQ9UBX1 RNA5SP479-201ENST00000364858 117 ntBASIC4.08□□□□□ -1.76
CTSFQ9UBX1 SNORA70C-201ENST00000384538 135 ntBASIC4.08□□□□□ -1.76
CTSFQ9UBX1 AMZ2P2-201ENST00000406819 1057 ntBASIC4.08□□□□□ -1.76
CTSFQ9UBX1 SNORA74C-2-201ENST00000411179 201 ntBASIC4.08□□□□□ -1.76
CTSFQ9UBX1 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.08□□□□□ -1.76
CTSFQ9UBX1 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms