Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC124312.6-202ENST00000623624 418 ntBASIC3.85□□□□□ -1.79
VPS29Q9UBQ0 MIR7641-1-201ENST00000627518 61 ntBASIC3.85□□□□□ -1.79
VPS29Q9UBQ0 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC3.85□□□□□ -1.79
VPS29Q9UBQ0 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.85□□□□□ -1.79
VPS29Q9UBQ0 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC3.85□□□□□ -1.79
VPS29Q9UBQ0 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VPS29Q9UBQ0 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VPS29Q9UBQ0 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
VPS29Q9UBQ0 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.85□□□□□ -1.79
VPS29Q9UBQ0 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.85□□□□□ -1.79
VPS29Q9UBQ0 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
VPS29Q9UBQ0 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VPS29Q9UBQ0 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.85□□□□□ -1.79
VPS29Q9UBQ0 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.85□□□□□ -1.79
VPS29Q9UBQ0 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VPS29Q9UBQ0 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VPS29Q9UBQ0 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
VPS29Q9UBQ0 PHKBP1-201ENST00000450951 1951 ntBASIC3.84□□□□□ -1.79
VPS29Q9UBQ0 AC018555.1-201ENST00000567548 1980 ntBASIC3.84□□□□□ -1.79
VPS29Q9UBQ0 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
VPS29Q9UBQ0 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.84□□□□□ -1.79
VPS29Q9UBQ0 RNA5SP105-201ENST00000391123 113 ntBASIC3.84□□□□□ -1.79
VPS29Q9UBQ0 RPS27AP11-201ENST00000402798 447 ntBASIC3.84□□□□□ -1.79
VPS29Q9UBQ0 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC3.84□□□□□ -1.79
VPS29Q9UBQ0 OR5BE1P-201ENST00000425977 939 ntBASIC3.84□□□□□ -1.79
VPS29Q9UBQ0 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.84□□□□□ -1.79
VPS29Q9UBQ0 ATP5HP2-201ENST00000433885 485 ntBASIC3.84□□□□□ -1.79
VPS29Q9UBQ0 KCTD9P3-201ENST00000434597 1169 ntBASIC3.84□□□□□ -1.79
VPS29Q9UBQ0 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.84□□□□□ -1.79
VPS29Q9UBQ0 AC073143.1-201ENST00000436316 395 ntBASIC3.84□□□□□ -1.79
VPS29Q9UBQ0 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.84□□□□□ -1.79
VPS29Q9UBQ0 RPSAP41-201ENST00000439695 860 ntBASIC3.84□□□□□ -1.79
VPS29Q9UBQ0 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.84□□□□□ -1.79
VPS29Q9UBQ0 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.84□□□□□ -1.79
VPS29Q9UBQ0 NDUFS5P3-201ENST00000450668 321 ntBASIC3.84□□□□□ -1.79
VPS29Q9UBQ0 HMGB3P22-202ENST00000451823 572 ntBASIC3.84□□□□□ -1.79
VPS29Q9UBQ0 IFNWP4-201ENST00000453148 294 ntBASIC3.84□□□□□ -1.79
VPS29Q9UBQ0 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.84□□□□□ -1.79
VPS29Q9UBQ0 RPS6P4-201ENST00000494693 758 ntBASIC3.84□□□□□ -1.79
VPS29Q9UBQ0 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.84□□□□□ -1.79
VPS29Q9UBQ0 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC3.84□□□□□ -1.79
VPS29Q9UBQ0 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.84□□□□□ -1.79
VPS29Q9UBQ0 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.84□□□□□ -1.79
VPS29Q9UBQ0 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.84□□□□□ -1.79
VPS29Q9UBQ0 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC3.84□□□□□ -1.79
VPS29Q9UBQ0 AC123786.2-201ENST00000603459 275 ntBASIC3.84□□□□□ -1.79
VPS29Q9UBQ0 AL139286.1-201ENST00000604465 483 ntBASIC3.84□□□□□ -1.79
VPS29Q9UBQ0 ARF4P1-201ENST00000605447 541 ntBASIC3.84□□□□□ -1.79
VPS29Q9UBQ0 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.84□□□□□ -1.79
VPS29Q9UBQ0 AC017076.1-201ENST00000607613 578 ntBASIC3.84□□□□□ -1.79
VPS29Q9UBQ0 AL591424.2-201ENST00000617023 128 ntBASIC3.84□□□□□ -1.79
VPS29Q9UBQ0 AL445567.2-201ENST00000618935 498 ntBASIC3.84□□□□□ -1.79
VPS29Q9UBQ0 AC067852.7-201ENST00000623270 535 ntBASIC3.84□□□□□ -1.79
VPS29Q9UBQ0 AP006248.2-201ENST00000623309 592 ntBASIC3.84□□□□□ -1.79
VPS29Q9UBQ0 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.84□□□□□ -1.79
VPS29Q9UBQ0 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.84□□□□□ -1.79
VPS29Q9UBQ0 OR5BE1P-202ENST00000641168 1176 ntBASIC3.84□□□□□ -1.79
VPS29Q9UBQ0 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
VPS29Q9UBQ0 IPO8P1-201ENST00000455509 3109 ntBASIC3.84□□□□□ -1.79
VPS29Q9UBQ0 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
VPS29Q9UBQ0 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
VPS29Q9UBQ0 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.84□□□□□ -1.79
VPS29Q9UBQ0 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.8
VPS29Q9UBQ0 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.84□□□□□ -1.8
VPS29Q9UBQ0 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.84□□□□□ -1.8
VPS29Q9UBQ0 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
VPS29Q9UBQ0 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC3.83□□□□□ -1.8
VPS29Q9UBQ0 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
VPS29Q9UBQ0 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.83□□□□□ -1.8
VPS29Q9UBQ0 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
VPS29Q9UBQ0 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.83□□□□□ -1.8
VPS29Q9UBQ0 ENSAP1-201ENST00000392855 326 ntBASIC3.83□□□□□ -1.8
VPS29Q9UBQ0 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
VPS29Q9UBQ0 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS29Q9UBQ0 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.83□□□□□ -1.8
VPS29Q9UBQ0 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS29Q9UBQ0 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.83□□□□□ -1.8
VPS29Q9UBQ0 MRPL50P1-201ENST00000431951 384 ntBASIC3.83□□□□□ -1.8
VPS29Q9UBQ0 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS29Q9UBQ0 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS29Q9UBQ0 NUTF2P3-201ENST00000448540 384 ntBASIC3.83□□□□□ -1.8
VPS29Q9UBQ0 TPT1P13-201ENST00000449760 499 ntBASIC3.83□□□□□ -1.8
VPS29Q9UBQ0 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.83□□□□□ -1.8
VPS29Q9UBQ0 RN7SL860P-201ENST00000473738 223 ntBASIC3.83□□□□□ -1.8
VPS29Q9UBQ0 AC069499.1-201ENST00000489433 509 ntBASIC3.83□□□□□ -1.8
VPS29Q9UBQ0 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS29Q9UBQ0 MGST2-204ENST00000506797 634 ntTSL 2 BASIC3.83□□□□□ -1.8
VPS29Q9UBQ0 MTHFD2P4-201ENST00000515074 1025 ntBASIC3.83□□□□□ -1.8
VPS29Q9UBQ0 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS29Q9UBQ0 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS29Q9UBQ0 AC109635.6-201ENST00000525487 1113 ntBASIC3.83□□□□□ -1.8
VPS29Q9UBQ0 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS29Q9UBQ0 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS29Q9UBQ0 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
VPS29Q9UBQ0 AC234775.3-201ENST00000564612 656 ntBASIC3.83□□□□□ -1.8
VPS29Q9UBQ0 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.83□□□□□ -1.8
VPS29Q9UBQ0 RN7SL600P-201ENST00000581811 299 ntBASIC3.83□□□□□ -1.8
VPS29Q9UBQ0 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.83□□□□□ -1.8
VPS29Q9UBQ0 AC110743.1-201ENST00000584870 478 ntBASIC3.83□□□□□ -1.8
VPS29Q9UBQ0 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms