Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.43□□□□□ -1.54
COL20A1Q9P218 AC034244.1-201ENST00000507687 207 ntBASIC5.43□□□□□ -1.54
COL20A1Q9P218 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC5.43□□□□□ -1.54
COL20A1Q9P218 ENPP7P9-201ENST00000514456 627 ntBASIC5.43□□□□□ -1.54
COL20A1Q9P218 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC5.43□□□□□ -1.54
COL20A1Q9P218 C1GALT1P3-201ENST00000522049 819 ntBASIC5.43□□□□□ -1.54
COL20A1Q9P218 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.43□□□□□ -1.54
COL20A1Q9P218 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.43□□□□□ -1.54
COL20A1Q9P218 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC5.43□□□□□ -1.54
COL20A1Q9P218 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC5.43□□□□□ -1.54
COL20A1Q9P218 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.43□□□□□ -1.54
COL20A1Q9P218 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.43□□□□□ -1.54
COL20A1Q9P218 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.43□□□□□ -1.54
COL20A1Q9P218 VN1R83P-201ENST00000595685 445 ntBASIC5.43□□□□□ -1.54
COL20A1Q9P218 BX005214.3-202ENST00000619809 325 ntBASIC5.43□□□□□ -1.54
COL20A1Q9P218 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
COL20A1Q9P218 AC087821.2-201ENST00000637086 450 ntBASIC5.43□□□□□ -1.54
COL20A1Q9P218 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL20A1Q9P218 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
COL20A1Q9P218 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
COL20A1Q9P218 ZNF876P-202ENST00000398732 1485 ntBASIC5.43□□□□□ -1.54
COL20A1Q9P218 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL20A1Q9P218 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.43□□□□□ -1.54
COL20A1Q9P218 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.43□□□□□ -1.54
COL20A1Q9P218 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
COL20A1Q9P218 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
COL20A1Q9P218 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
COL20A1Q9P218 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COL20A1Q9P218 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL20A1Q9P218 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL20A1Q9P218 AL138820.1-201ENST00000617901 5305 ntBASIC5.42□□□□□ -1.54
COL20A1Q9P218 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COL20A1Q9P218 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.42□□□□□ -1.54
COL20A1Q9P218 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.42□□□□□ -1.54
COL20A1Q9P218 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL20A1Q9P218 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL20A1Q9P218 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
COL20A1Q9P218 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL20A1Q9P218 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL20A1Q9P218 RNU6-1242P-201ENST00000391052 103 ntBASIC5.42□□□□□ -1.54
COL20A1Q9P218 MTND4P13-201ENST00000402078 1023 ntBASIC5.42□□□□□ -1.54
COL20A1Q9P218 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.42□□□□□ -1.54
COL20A1Q9P218 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5.42□□□□□ -1.54
COL20A1Q9P218 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.42□□□□□ -1.54
COL20A1Q9P218 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.42□□□□□ -1.54
COL20A1Q9P218 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.42□□□□□ -1.54
COL20A1Q9P218 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.42□□□□□ -1.54
COL20A1Q9P218 AC092162.1-201ENST00000432828 434 ntBASIC5.42□□□□□ -1.54
COL20A1Q9P218 RPL21P110-201ENST00000433345 446 ntBASIC5.42□□□□□ -1.54
COL20A1Q9P218 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COL20A1Q9P218 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.42□□□□□ -1.54
COL20A1Q9P218 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.42□□□□□ -1.54
COL20A1Q9P218 AC108463.1-201ENST00000450258 347 ntBASIC5.42□□□□□ -1.54
COL20A1Q9P218 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.42□□□□□ -1.54
COL20A1Q9P218 RPL21P6-201ENST00000479171 504 ntBASIC5.42□□□□□ -1.54
COL20A1Q9P218 AL161747.1-201ENST00000480068 358 ntBASIC5.42□□□□□ -1.54
COL20A1Q9P218 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.42□□□□□ -1.54
COL20A1Q9P218 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COL20A1Q9P218 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COL20A1Q9P218 AC093534.1-201ENST00000504977 132 ntBASIC5.42□□□□□ -1.54
COL20A1Q9P218 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COL20A1Q9P218 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC5.42□□□□□ -1.54
COL20A1Q9P218 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.42□□□□□ -1.54
COL20A1Q9P218 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COL20A1Q9P218 SNORA3.4-201ENST00000515969 96 ntBASIC5.42□□□□□ -1.54
COL20A1Q9P218 Y_RNA.719-201ENST00000517156 106 ntBASIC5.42□□□□□ -1.54
COL20A1Q9P218 AC105031.1-201ENST00000518550 476 ntBASIC5.42□□□□□ -1.54
COL20A1Q9P218 MRPS36P3-201ENST00000519284 130 ntBASIC5.42□□□□□ -1.54
COL20A1Q9P218 RAB9BP1-201ENST00000519581 626 ntBASIC5.42□□□□□ -1.54
COL20A1Q9P218 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC5.42□□□□□ -1.54
COL20A1Q9P218 IGJP1-201ENST00000522682 475 ntBASIC5.42□□□□□ -1.54
COL20A1Q9P218 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COL20A1Q9P218 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC5.42□□□□□ -1.54
COL20A1Q9P218 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COL20A1Q9P218 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.42□□□□□ -1.54
COL20A1Q9P218 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.42□□□□□ -1.54
COL20A1Q9P218 AC044913.1-201ENST00000557200 430 ntBASIC5.42□□□□□ -1.54
COL20A1Q9P218 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC5.42□□□□□ -1.54
COL20A1Q9P218 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COL20A1Q9P218 MIR5708-201ENST00000579723 85 ntBASIC5.42□□□□□ -1.54
COL20A1Q9P218 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC5.42□□□□□ -1.54
COL20A1Q9P218 AC069366.1-201ENST00000583159 838 ntBASIC5.42□□□□□ -1.54
COL20A1Q9P218 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC5.42□□□□□ -1.54
COL20A1Q9P218 AC015688.2-201ENST00000584523 262 ntBASIC5.42□□□□□ -1.54
COL20A1Q9P218 AP001269.3-201ENST00000588718 329 ntBASIC5.42□□□□□ -1.54
COL20A1Q9P218 VN1R78P-201ENST00000597393 564 ntBASIC5.42□□□□□ -1.54
COL20A1Q9P218 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC5.42□□□□□ -1.54
COL20A1Q9P218 AP000238.1-201ENST00000608759 426 ntBASIC5.42□□□□□ -1.54
COL20A1Q9P218 AL592148.2-201ENST00000612210 372 ntBASIC5.42□□□□□ -1.54
COL20A1Q9P218 BNIP3P41-202ENST00000616656 861 ntBASIC5.42□□□□□ -1.54
COL20A1Q9P218 AP003485.2-201ENST00000623636 610 ntBASIC5.42□□□□□ -1.54
COL20A1Q9P218 AC016717.3-201ENST00000624730 554 ntBASIC5.42□□□□□ -1.54
COL20A1Q9P218 AC073869.10-201ENST00000642016 354 ntBASIC5.42□□□□□ -1.54
COL20A1Q9P218 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.42□□□□□ -1.54
COL20A1Q9P218 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL20A1Q9P218 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COL20A1Q9P218 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
COL20A1Q9P218 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL20A1Q9P218 AC104446.1-201ENST00000613728 1321 ntBASIC5.42□□□□□ -1.54
COL20A1Q9P218 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms