Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 RNU6-248P-201ENST00000410720 107 ntBASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 RPS4XP5-201ENST00000419038 768 ntBASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 BX323845.3-201ENST00000428215 527 ntBASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 AL512649.1-201ENST00000428997 581 ntBASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 USP24P1-201ENST00000433802 779 ntBASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 AC073410.1-201ENST00000435125 589 ntBASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 RPS10P18-201ENST00000442662 495 ntBASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 AC005077.1-201ENST00000449226 375 ntBASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 AP000852.1-201ENST00000472460 573 ntBASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 HMGN1P10-201ENST00000474557 553 ntBASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 TRBV8-2-201ENST00000475637 270 ntBASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 AC013828.1-201ENST00000481845 158 ntBASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 RPL7P38-201ENST00000488396 739 ntBASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 AC111193.1-201ENST00000504097 155 ntBASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 AC011352.3-201ENST00000505162 593 ntBASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 AP002812.4-201ENST00000532139 286 ntBASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 AC090424.1-201ENST00000535243 736 ntBASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 OR6C73P-201ENST00000546432 358 ntBASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 AC007956.1-201ENST00000555623 542 ntBASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 RPA2P1-201ENST00000556557 721 ntBASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 NPM1P42-201ENST00000560329 862 ntBASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 TXNP4-201ENST00000575018 310 ntBASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 BPTFP1-201ENST00000579209 492 ntBASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 DUXAP4-201ENST00000603046 613 ntBASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 AC011472.4-201ENST00000615848 491 ntBASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 OR8G7P-201ENST00000616658 848 ntBASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 AC245014.3-201ENST00000618589 347 ntBASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 AC120349.2-201ENST00000625002 298 ntBASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 AC119674.1-212ENST00000641155 993 ntBASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
SEC61A2Q9H9S3 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.57
SEC61A2Q9H9S3 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.21□□□□□ -1.57
SEC61A2Q9H9S3 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.21□□□□□ -1.57
SEC61A2Q9H9S3 ZNF680P1-201ENST00000436625 1469 ntBASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 SELENOWP1-201ENST00000322792 252 ntBASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 RNU6-666P-201ENST00000363499 107 ntBASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 RNU6-1090P-201ENST00000364065 94 ntBASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 RNU6-780P-201ENST00000391030 104 ntBASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 RPL23AP29-201ENST00000397284 453 ntBASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 CYCSP11-201ENST00000436426 315 ntBASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 TUBB4BP6-201ENST00000437576 479 ntBASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 BMS1P10-201ENST00000443754 1120 ntBASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 ANKRD30BP3-201ENST00000444850 1070 ntBASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 AC144530.1-201ENST00000452862 555 ntBASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 AL033528.1-201ENST00000453780 140 ntBASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 BX248409.1-201ENST00000455497 255 ntBASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 RPL38P3-201ENST00000484463 213 ntBASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 LARP1BP2-201ENST00000486594 519 ntBASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 AC108078.3-201ENST00000502633 489 ntBASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 DUTP7-201ENST00000507982 486 ntBASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 NDUFB4P2-201ENST00000509515 391 ntBASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 PTGES3P3-201ENST00000511479 482 ntBASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 RNU6-1153P-201ENST00000516760 105 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms