Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 RNU6-839P-201ENST00000363347 108 ntBASIC6□□□□□ -1.45
FOXP3Q9BZS1 RNU6-666P-201ENST00000363499 107 ntBASIC6□□□□□ -1.45
FOXP3Q9BZS1 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
FOXP3Q9BZS1 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
FOXP3Q9BZS1 RNU6-532P-201ENST00000384318 107 ntBASIC6□□□□□ -1.45
FOXP3Q9BZS1 RNU6-1300P-201ENST00000391046 108 ntBASIC6□□□□□ -1.45
FOXP3Q9BZS1 SNORA17A-201ENST00000391185 133 ntBASIC6□□□□□ -1.45
FOXP3Q9BZS1 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC6□□□□□ -1.45
FOXP3Q9BZS1 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6□□□□□ -1.45
FOXP3Q9BZS1 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6□□□□□ -1.45
FOXP3Q9BZS1 AC012498.1-201ENST00000424037 437 ntBASIC6□□□□□ -1.45
FOXP3Q9BZS1 MRPS21P2-201ENST00000424704 264 ntBASIC6□□□□□ -1.45
FOXP3Q9BZS1 RWDD4P2-201ENST00000426392 563 ntBASIC6□□□□□ -1.45
FOXP3Q9BZS1 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC6□□□□□ -1.45
FOXP3Q9BZS1 TRIM60P3Y-201ENST00000432201 673 ntBASIC6□□□□□ -1.45
FOXP3Q9BZS1 FTLP19-201ENST00000433300 394 ntBASIC6□□□□□ -1.45
FOXP3Q9BZS1 AC239367.2-201ENST00000447309 705 ntBASIC6□□□□□ -1.45
FOXP3Q9BZS1 Z99127.3-201ENST00000448158 395 ntBASIC6□□□□□ -1.45
FOXP3Q9BZS1 NFU1P2-201ENST00000448700 469 ntBASIC6□□□□□ -1.45
FOXP3Q9BZS1 RPL31P15-201ENST00000449770 338 ntBASIC6□□□□□ -1.45
FOXP3Q9BZS1 RPL7P31-201ENST00000450192 724 ntBASIC6□□□□□ -1.45
FOXP3Q9BZS1 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC6□□□□□ -1.45
FOXP3Q9BZS1 OR2A1-AS1-202ENST00000467944 422 ntBASIC6□□□□□ -1.45
FOXP3Q9BZS1 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6□□□□□ -1.45
FOXP3Q9BZS1 AC092989.1-201ENST00000481235 277 ntBASIC6□□□□□ -1.45
FOXP3Q9BZS1 OR5H5P-201ENST00000503164 928 ntBASIC6□□□□□ -1.45
FOXP3Q9BZS1 AC111193.1-201ENST00000504097 155 ntBASIC6□□□□□ -1.45
FOXP3Q9BZS1 PDLIM1P4-201ENST00000504327 1006 ntBASIC6□□□□□ -1.45
FOXP3Q9BZS1 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC6□□□□□ -1.45
FOXP3Q9BZS1 SNX5P1-201ENST00000505757 1041 ntBASIC6□□□□□ -1.45
FOXP3Q9BZS1 Y_RNA.667-201ENST00000516212 107 ntBASIC6□□□□□ -1.45
FOXP3Q9BZS1 SCARNA21.2-201ENST00000516600 166 ntBASIC6□□□□□ -1.45
FOXP3Q9BZS1 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6□□□□□ -1.45
FOXP3Q9BZS1 AP003396.4-201ENST00000527574 265 ntBASIC6□□□□□ -1.45
FOXP3Q9BZS1 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6□□□□□ -1.45
FOXP3Q9BZS1 AC027026.1-201ENST00000532323 742 ntBASIC6□□□□□ -1.45
FOXP3Q9BZS1 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC6□□□□□ -1.45
FOXP3Q9BZS1 AC137768.1-201ENST00000549998 553 ntBASIC6□□□□□ -1.45
FOXP3Q9BZS1 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6□□□□□ -1.45
FOXP3Q9BZS1 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6□□□□□ -1.45
FOXP3Q9BZS1 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC6□□□□□ -1.45
FOXP3Q9BZS1 AP001004.1-201ENST00000582468 324 ntBASIC6□□□□□ -1.45
FOXP3Q9BZS1 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6□□□□□ -1.45
FOXP3Q9BZS1 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC6□□□□□ -1.45
FOXP3Q9BZS1 AC005084.1-201ENST00000605160 304 ntBASIC6□□□□□ -1.45
FOXP3Q9BZS1 AC098614.4-201ENST00000607601 462 ntBASIC6□□□□□ -1.45
FOXP3Q9BZS1 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC6□□□□□ -1.45
FOXP3Q9BZS1 AP000648.2-201ENST00000624182 404 ntBASIC6□□□□□ -1.45
FOXP3Q9BZS1 SNORA17.5-201ENST00000630429 132 ntBASIC6□□□□□ -1.45
FOXP3Q9BZS1 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC6□□□□□ -1.45
FOXP3Q9BZS1 FAM157B-203ENST00000639350 358 ntBASIC6□□□□□ -1.45
FOXP3Q9BZS1 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
FOXP3Q9BZS1 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
FOXP3Q9BZS1 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
FOXP3Q9BZS1 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6□□□□□ -1.45
FOXP3Q9BZS1 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC6□□□□□ -1.45
FOXP3Q9BZS1 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6□□□□□ -1.45
FOXP3Q9BZS1 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6□□□□□ -1.45
FOXP3Q9BZS1 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
FOXP3Q9BZS1 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6□□□□□ -1.45
FOXP3Q9BZS1 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
FOXP3Q9BZS1 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6□□□□□ -1.45
FOXP3Q9BZS1 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
FOXP3Q9BZS1 AL354685.2-201ENST00000448218 1447 ntBASIC5.99□□□□□ -1.45
FOXP3Q9BZS1 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
FOXP3Q9BZS1 AC114786.1-201ENST00000512892 1415 ntBASIC5.99□□□□□ -1.45
FOXP3Q9BZS1 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.99□□□□□ -1.45
FOXP3Q9BZS1 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
FOXP3Q9BZS1 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
FOXP3Q9BZS1 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
FOXP3Q9BZS1 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
FOXP3Q9BZS1 MFSD8-239ENST00000641590 2479 ntBASIC5.99□□□□□ -1.45
FOXP3Q9BZS1 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.99□□□□□ -1.45
FOXP3Q9BZS1 AC006484.1-201ENST00000435086 1884 ntBASIC5.99□□□□□ -1.45
FOXP3Q9BZS1 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
FOXP3Q9BZS1 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.99□□□□□ -1.45
FOXP3Q9BZS1 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
FOXP3Q9BZS1 RNU4-76P-201ENST00000364509 141 ntBASIC5.99□□□□□ -1.45
FOXP3Q9BZS1 Y_RNA.450-201ENST00000384198 113 ntBASIC5.99□□□□□ -1.45
FOXP3Q9BZS1 RN7SKP229-201ENST00000410465 302 ntBASIC5.99□□□□□ -1.45
FOXP3Q9BZS1 OR51A3P-201ENST00000413596 924 ntBASIC5.99□□□□□ -1.45
FOXP3Q9BZS1 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
FOXP3Q9BZS1 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.99□□□□□ -1.45
FOXP3Q9BZS1 RPS4XP5-201ENST00000419038 768 ntBASIC5.99□□□□□ -1.45
FOXP3Q9BZS1 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.99□□□□□ -1.45
FOXP3Q9BZS1 AC093698.1-201ENST00000423843 571 ntBASIC5.99□□□□□ -1.45
FOXP3Q9BZS1 CHEK2P5-201ENST00000423877 246 ntBASIC5.99□□□□□ -1.45
FOXP3Q9BZS1 MTND1P14-201ENST00000427400 950 ntBASIC5.99□□□□□ -1.45
FOXP3Q9BZS1 VTI1BP4-201ENST00000427516 527 ntBASIC5.99□□□□□ -1.45
FOXP3Q9BZS1 AL445928.1-201ENST00000435545 222 ntBASIC5.99□□□□□ -1.45
FOXP3Q9BZS1 RPL23AP19-201ENST00000436229 369 ntBASIC5.99□□□□□ -1.45
FOXP3Q9BZS1 RPS12P17-201ENST00000438591 377 ntBASIC5.99□□□□□ -1.45
FOXP3Q9BZS1 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC5.99□□□□□ -1.45
FOXP3Q9BZS1 AC004865.1-201ENST00000442276 1003 ntBASIC5.99□□□□□ -1.45
FOXP3Q9BZS1 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.99□□□□□ -1.45
FOXP3Q9BZS1 FTLP8-201ENST00000446770 267 ntBASIC5.99□□□□□ -1.45
FOXP3Q9BZS1 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC5.99□□□□□ -1.45
FOXP3Q9BZS1 AC007998.1-201ENST00000474156 672 ntBASIC5.99□□□□□ -1.45
FOXP3Q9BZS1 AP000797.1-201ENST00000478870 387 ntBASIC5.99□□□□□ -1.45
FOXP3Q9BZS1 PPIAP19-201ENST00000486414 492 ntBASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms