Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 PPFIA2-202ENST00000407050 3903 ntTSL 2 BASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 SPATA31C1-201ENST00000420021 3895 ntBASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 PAH-201ENST00000307000 2466 ntTSL 5 BASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 AL121950.1-201ENST00000624993 2077 ntBASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 AC006020.1-201ENST00000420179 1854 ntBASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 RNU1-19P-201ENST00000363306 165 ntBASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 RNU6-770P-201ENST00000363929 105 ntBASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 SNORD50B-201ENST00000364995 70 ntBASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 Y_RNA.396-201ENST00000383949 103 ntBASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 SNORD116-23-201ENST00000384645 92 ntBASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 AC008171.1-201ENST00000395058 200 ntBASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 AL360271.1-201ENST00000395679 510 ntBASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 MRPL42P2-201ENST00000403169 426 ntBASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 AL390316.1-201ENST00000406279 553 ntBASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 RN7SKP121-201ENST00000410842 305 ntBASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 AC127526.1-201ENST00000417526 366 ntBASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 BOLA3P4-201ENST00000418151 400 ntBASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 RBMY2KP-201ENST00000418221 992 ntBASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 AC243428.1-201ENST00000421099 264 ntBASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 RPL7P59-201ENST00000447700 943 ntBASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 RNU7-27P-201ENST00000459281 62 ntBASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 RPS20P21-201ENST00000466859 343 ntBASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 RN7SL751P-201ENST00000473281 284 ntBASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 AC098583.1-201ENST00000480875 255 ntBASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 AL136038.1-201ENST00000497246 351 ntBASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 AL035404.1-201ENST00000497982 568 ntBASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 LSM3P4-201ENST00000502948 309 ntBASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 AK3P4-201ENST00000504283 583 ntBASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 SSX8-201ENST00000506270 579 ntBASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 FAM206BP-201ENST00000510179 541 ntBASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 RNA5SP318-201ENST00000516352 92 ntBASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 IGKV2D-10-201ENST00000520194 281 ntBASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 MRPS16P1-201ENST00000523462 412 ntBASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 AC023157.2-201ENST00000540596 141 ntBASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 HMGB1P6-201ENST00000569046 646 ntBASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 AP001180.3-201ENST00000582221 145 ntBASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 BCRP9-201ENST00000605312 388 ntBASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 RNU6-87P-201ENST00000607561 108 ntBASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 5S_rRNA.23-201ENST00000612086 102 ntBASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 AP005212.3-201ENST00000619964 528 ntBASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 AC132825.6-201ENST00000638861 357 ntBASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 LGI1-211ENST00000630047 1751 ntTSL 2 BASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 MFSD4BP1-201ENST00000513330 1552 ntBASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
CNTNAP3Q9BZ76 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CNTNAP3Q9BZ76 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC6.55□□□□□ -1.36
CNTNAP3Q9BZ76 AC093311.1-201ENST00000506586 2021 ntBASIC6.55□□□□□ -1.36
CNTNAP3Q9BZ76 AC003973.3-201ENST00000624863 2822 ntBASIC6.55□□□□□ -1.36
CNTNAP3Q9BZ76 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CNTNAP3Q9BZ76 ASNSP3-201ENST00000451989 1306 ntBASIC6.55□□□□□ -1.36
CNTNAP3Q9BZ76 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.55□□□□□ -1.36
CNTNAP3Q9BZ76 PLP1-220ENST00000612423 3132 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
CNTNAP3Q9BZ76 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 142.3 ms