Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
TRIM55Q9BYV6 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.93□□□□□ -1.46
TRIM55Q9BYV6 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TRIM55Q9BYV6 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TRIM55Q9BYV6 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.93□□□□□ -1.46
TRIM55Q9BYV6 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
TRIM55Q9BYV6 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.93□□□□□ -1.46
TRIM55Q9BYV6 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 PARP4P2-201ENST00000446672 3326 ntBASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 MFSD8-239ENST00000641590 2479 ntBASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 AL356473.1-201ENST00000406203 1408 ntBASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 OR10J6P-201ENST00000289731 930 ntBASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 RNA5SP510-201ENST00000364697 99 ntBASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 RN7SKP69-201ENST00000365390 305 ntBASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 MIR130B-202ENST00000385018 82 ntBASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 AC087752.1-201ENST00000391360 558 ntBASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 MTCYBP36-201ENST00000404146 440 ntBASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 RPL17P12-201ENST00000413391 526 ntBASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 RPS3AP9-201ENST00000417027 792 ntBASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 RPL7P30-201ENST00000420888 709 ntBASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 SSXP1-201ENST00000453640 473 ntBASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 PPIAP7-201ENST00000454070 489 ntBASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 RPL12P39-201ENST00000455456 496 ntBASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 SUMO2P2-201ENST00000456482 255 ntBASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 AC023194.2-201ENST00000465398 406 ntBASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 RN7SL101P-201ENST00000496350 279 ntBASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 ARL2BPP4-201ENST00000506854 471 ntBASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 AC113430.1-201ENST00000506872 718 ntBASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 AP000620.1-201ENST00000527147 504 ntBASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 ZNF705CP-201ENST00000530515 889 ntBASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 AC126615.2-201ENST00000553003 515 ntBASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 AL591167.1-201ENST00000607321 456 ntBASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 MESTIT1_2.1-201ENST00000616328 235 ntBASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 AC073968.1-201ENST00000618594 637 ntBASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 FAM27E2-201ENST00000619668 403 ntBASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 PACRG-211ENST00000621363 360 ntTSL 5 BASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 MIR4302-201ENST00000638058 60 ntBASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
TRIM55Q9BYV6 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM55Q9BYV6 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.91□□□□□ -1.46
TRIM55Q9BYV6 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
TRIM55Q9BYV6 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
TRIM55Q9BYV6 AL590763.1-201ENST00000398297 1545 ntBASIC5.91□□□□□ -1.46
TRIM55Q9BYV6 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM55Q9BYV6 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM55Q9BYV6 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.91□□□□□ -1.46
TRIM55Q9BYV6 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM55Q9BYV6 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.91□□□□□ -1.46
TRIM55Q9BYV6 HMGB1P17-201ENST00000403495 628 ntBASIC5.91□□□□□ -1.46
TRIM55Q9BYV6 ZNF603P-201ENST00000405613 487 ntBASIC5.91□□□□□ -1.46
TRIM55Q9BYV6 AL512422.1-201ENST00000407033 553 ntBASIC5.91□□□□□ -1.46
TRIM55Q9BYV6 AL023807.1-201ENST00000407932 359 ntBASIC5.91□□□□□ -1.46
TRIM55Q9BYV6 RN7SKP206-201ENST00000410823 293 ntBASIC5.91□□□□□ -1.46
TRIM55Q9BYV6 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.91□□□□□ -1.46
TRIM55Q9BYV6 AC109780.2-201ENST00000413467 845 ntBASIC5.91□□□□□ -1.46
TRIM55Q9BYV6 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.91□□□□□ -1.46
TRIM55Q9BYV6 NPM1P18-201ENST00000434232 732 ntBASIC5.91□□□□□ -1.46
TRIM55Q9BYV6 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC5.91□□□□□ -1.46
TRIM55Q9BYV6 ATP5LP2-201ENST00000440646 311 ntBASIC5.91□□□□□ -1.46
TRIM55Q9BYV6 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC5.91□□□□□ -1.46
TRIM55Q9BYV6 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
TRIM55Q9BYV6 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC5.91□□□□□ -1.46
TRIM55Q9BYV6 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.91□□□□□ -1.46
TRIM55Q9BYV6 MTCYBP1-201ENST00000454315 1119 ntBASIC5.91□□□□□ -1.46
TRIM55Q9BYV6 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.91□□□□□ -1.46
TRIM55Q9BYV6 AC091564.1-201ENST00000464563 479 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms