Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 OR4G1P-201ENST00000588632 938 ntBASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 AC091834.1-201ENST00000614543 472 ntBASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 AC129778.1-202ENST00000623812 261 ntBASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 AL591379.1-207ENST00000635982 261 ntBASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 AL049780.3-201ENST00000624612 1583 ntBASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 AC119674.1-213ENST00000641177 1386 ntBASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 ZNF734P-201ENST00000419494 1534 ntBASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.8□□□□□ -1.32
TRAIPQ9BWF2 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
TRAIPQ9BWF2 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
TRAIPQ9BWF2 WAC-209ENST00000428935 1320 ntTSL 2 BASIC6.8□□□□□ -1.32
TRAIPQ9BWF2 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.8□□□□□ -1.32
TRAIPQ9BWF2 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.8□□□□□ -1.32
TRAIPQ9BWF2 SNORD8-201ENST00000363915 110 ntBASIC6.8□□□□□ -1.32
TRAIPQ9BWF2 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
TRAIPQ9BWF2 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC6.8□□□□□ -1.32
TRAIPQ9BWF2 Y_RNA.516-201ENST00000384541 124 ntBASIC6.8□□□□□ -1.32
TRAIPQ9BWF2 MIR130B-202ENST00000385018 82 ntBASIC6.8□□□□□ -1.32
TRAIPQ9BWF2 AC092642.1-201ENST00000392417 425 ntBASIC6.8□□□□□ -1.32
TRAIPQ9BWF2 Y_RNA.608-201ENST00000410647 95 ntBASIC6.8□□□□□ -1.32
TRAIPQ9BWF2 RPS3AP3-201ENST00000411933 242 ntBASIC6.8□□□□□ -1.32
TRAIPQ9BWF2 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
TRAIPQ9BWF2 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.8□□□□□ -1.32
TRAIPQ9BWF2 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
TRAIPQ9BWF2 MTND1P4-201ENST00000435196 415 ntBASIC6.8□□□□□ -1.32
TRAIPQ9BWF2 RSU1P2-202ENST00000437884 485 ntBASIC6.8□□□□□ -1.32
TRAIPQ9BWF2 OR3D1P-201ENST00000438288 955 ntBASIC6.8□□□□□ -1.32
TRAIPQ9BWF2 AL353662.1-201ENST00000439099 327 ntBASIC6.8□□□□□ -1.32
TRAIPQ9BWF2 MTND1P1-201ENST00000445453 368 ntBASIC6.8□□□□□ -1.32
TRAIPQ9BWF2 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC6.8□□□□□ -1.32
TRAIPQ9BWF2 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC6.8□□□□□ -1.32
TRAIPQ9BWF2 AL445466.1-201ENST00000448432 357 ntBASIC6.8□□□□□ -1.32
TRAIPQ9BWF2 VN1R38P-201ENST00000450265 887 ntBASIC6.8□□□□□ -1.32
TRAIPQ9BWF2 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.8□□□□□ -1.32
TRAIPQ9BWF2 AC087385.1-201ENST00000475062 312 ntBASIC6.8□□□□□ -1.32
TRAIPQ9BWF2 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC6.8□□□□□ -1.32
TRAIPQ9BWF2 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
TRAIPQ9BWF2 AP005639.1-201ENST00000526939 192 ntBASIC6.8□□□□□ -1.32
TRAIPQ9BWF2 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.8□□□□□ -1.32
TRAIPQ9BWF2 AC016957.1-201ENST00000534895 309 ntBASIC6.8□□□□□ -1.32
TRAIPQ9BWF2 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC6.8□□□□□ -1.32
TRAIPQ9BWF2 AC079905.1-201ENST00000549280 475 ntBASIC6.8□□□□□ -1.32
TRAIPQ9BWF2 PCNPP1-201ENST00000552501 511 ntBASIC6.8□□□□□ -1.32
TRAIPQ9BWF2 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.8□□□□□ -1.32
TRAIPQ9BWF2 AC009063.1-201ENST00000563342 702 ntBASIC6.8□□□□□ -1.32
TRAIPQ9BWF2 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC6.8□□□□□ -1.32
TRAIPQ9BWF2 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC6.8□□□□□ -1.32
TRAIPQ9BWF2 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC6.8□□□□□ -1.32
TRAIPQ9BWF2 AL353997.4-201ENST00000586196 166 ntBASIC6.8□□□□□ -1.32
TRAIPQ9BWF2 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.8□□□□□ -1.32
TRAIPQ9BWF2 AL355812.1-201ENST00000603215 216 ntBASIC6.8□□□□□ -1.32
TRAIPQ9BWF2 BCRP9-201ENST00000605312 388 ntBASIC6.8□□□□□ -1.32
TRAIPQ9BWF2 AL008729.2-201ENST00000606393 473 ntBASIC6.8□□□□□ -1.32
TRAIPQ9BWF2 AC093388.1-201ENST00000609166 430 ntBASIC6.8□□□□□ -1.32
TRAIPQ9BWF2 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.8□□□□□ -1.32
TRAIPQ9BWF2 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.8□□□□□ -1.32
TRAIPQ9BWF2 AL355480.1-201ENST00000629041 99 ntBASIC6.8□□□□□ -1.32
TRAIPQ9BWF2 SEPT14P19-203ENST00000633205 211 ntBASIC6.8□□□□□ -1.32
TRAIPQ9BWF2 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC6.8□□□□□ -1.32
TRAIPQ9BWF2 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
TRAIPQ9BWF2 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
TRAIPQ9BWF2 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
TRAIPQ9BWF2 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
TRAIPQ9BWF2 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.79□□□□□ -1.32
TRAIPQ9BWF2 AC110373.1-201ENST00000505994 3505 ntBASIC6.79□□□□□ -1.32
TRAIPQ9BWF2 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
TRAIPQ9BWF2 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
TRAIPQ9BWF2 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
TRAIPQ9BWF2 PHACTR2P1-201ENST00000605639 1414 ntBASIC6.79□□□□□ -1.32
TRAIPQ9BWF2 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC6.79□□□□□ -1.32
TRAIPQ9BWF2 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.79□□□□□ -1.32
TRAIPQ9BWF2 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
TRAIPQ9BWF2 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.79□□□□□ -1.32
TRAIPQ9BWF2 FCF1P10-201ENST00000407590 479 ntBASIC6.79□□□□□ -1.32
TRAIPQ9BWF2 HMGN1P20-201ENST00000411849 300 ntBASIC6.79□□□□□ -1.32
TRAIPQ9BWF2 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC6.79□□□□□ -1.32
TRAIPQ9BWF2 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC6.79□□□□□ -1.32
TRAIPQ9BWF2 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.79□□□□□ -1.32
TRAIPQ9BWF2 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.79□□□□□ -1.32
TRAIPQ9BWF2 AC069213.2-201ENST00000420238 366 ntBASIC6.79□□□□□ -1.32
TRAIPQ9BWF2 RPS29P14-201ENST00000431518 171 ntBASIC6.79□□□□□ -1.32
TRAIPQ9BWF2 RPL12P17-201ENST00000432393 498 ntBASIC6.79□□□□□ -1.32
TRAIPQ9BWF2 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC6.79□□□□□ -1.32
TRAIPQ9BWF2 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.79□□□□□ -1.32
TRAIPQ9BWF2 RABEPKP1-201ENST00000440529 1026 ntBASIC6.79□□□□□ -1.32
TRAIPQ9BWF2 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC6.79□□□□□ -1.32
TRAIPQ9BWF2 AL589765.3-201ENST00000446084 462 ntBASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms