Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC010680.3-201ENST00000604215 520 ntBASIC6.55□□□□□ -1.36
SYNGAP1Q96PV0 AL352984.2-202ENST00000613699 155 ntBASIC6.55□□□□□ -1.36
SYNGAP1Q96PV0 MESTIT1_2.1-201ENST00000616328 235 ntBASIC6.55□□□□□ -1.36
SYNGAP1Q96PV0 AC063952.1-203ENST00000634410 658 ntBASIC6.55□□□□□ -1.36
SYNGAP1Q96PV0 OR52B5P-202ENST00000641118 1110 ntBASIC6.55□□□□□ -1.36
SYNGAP1Q96PV0 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SYNGAP1Q96PV0 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
SYNGAP1Q96PV0 AC092326.2-201ENST00000624772 1561 ntBASIC6.55□□□□□ -1.36
SYNGAP1Q96PV0 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
SYNGAP1Q96PV0 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SYNGAP1Q96PV0 NSRP1P1-201ENST00000444067 1693 ntBASIC6.55□□□□□ -1.36
SYNGAP1Q96PV0 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SYNGAP1Q96PV0 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.55□□□□□ -1.36
SYNGAP1Q96PV0 ZNF680P1-201ENST00000436625 1469 ntBASIC6.55□□□□□ -1.36
SYNGAP1Q96PV0 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC6.55□□□□□ -1.36
SYNGAP1Q96PV0 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 AC008033.1-201ENST00000216407 1162 ntBASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 CBX3P1-201ENST00000325243 554 ntBASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 RNU5D-1-201ENST00000363299 116 ntBASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 RNU6-1339P-201ENST00000363574 91 ntBASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 RNU6-621P-201ENST00000364752 109 ntBASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 SNORA40.3-201ENST00000390964 122 ntBASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 FGF7P8-201ENST00000402994 292 ntBASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 CIR1P3-201ENST00000405137 479 ntBASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 GAPDHP42-201ENST00000406848 981 ntBASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 RPL23AP27-201ENST00000415161 451 ntBASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 OFD1P12Y-201ENST00000427963 1207 ntBASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 PPIAP17-201ENST00000438507 471 ntBASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 OR7E125P-201ENST00000443450 846 ntBASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 AC100832.1-201ENST00000471945 383 ntBASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 RPS29P22-201ENST00000472363 168 ntBASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 OR2AO1P-201ENST00000476497 403 ntBASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 RN7SL570P-201ENST00000484405 292 ntBASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 ACTG1P13-201ENST00000486987 1043 ntBASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 AC091951.2-201ENST00000500762 203 ntBASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 MTCYBP17-201ENST00000503579 789 ntBASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 RN7SKP288-201ENST00000516227 268 ntBASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 RNU6-875P-201ENST00000516488 106 ntBASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 RN7SKP66-201ENST00000516681 231 ntBASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 SNORA20.3-201ENST00000516880 132 ntBASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 AC139365.2-201ENST00000517972 253 ntBASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 AC008802.1-201ENST00000519121 791 ntBASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 CENPUP2-201ENST00000555897 1186 ntBASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 MIR4666A-201ENST00000580160 79 ntBASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 BNIP3P22-201ENST00000593399 556 ntBASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 VN1R79P-201ENST00000593540 513 ntBASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 FKBP1AP1-201ENST00000594588 318 ntBASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 AL354760.1-201ENST00000608357 643 ntBASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 AC024560.3-201ENST00000608482 349 ntBASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 MIR378J-201ENST00000611988 109 ntBASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 AC027807.2-201ENST00000616099 408 ntBASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 MIR8080-201ENST00000622224 89 ntBASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
SYNGAP1Q96PV0 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
SYNGAP1Q96PV0 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
SYNGAP1Q96PV0 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
SYNGAP1Q96PV0 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms