Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 RN7SKP277-201ENST00000516895 283 ntBASIC4.64□□□□□ -1.67
VMP1Q96GC9 AC087272.1-201ENST00000523624 533 ntBASIC4.64□□□□□ -1.67
VMP1Q96GC9 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.64□□□□□ -1.67
VMP1Q96GC9 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.64□□□□□ -1.67
VMP1Q96GC9 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.64□□□□□ -1.67
VMP1Q96GC9 CBX3P5-201ENST00000552017 521 ntBASIC4.64□□□□□ -1.67
VMP1Q96GC9 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.64□□□□□ -1.67
VMP1Q96GC9 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.64□□□□□ -1.67
VMP1Q96GC9 MIR4436B2-201ENST00000581415 91 ntBASIC4.64□□□□□ -1.67
VMP1Q96GC9 MIR4436B1-201ENST00000583272 91 ntBASIC4.64□□□□□ -1.67
VMP1Q96GC9 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.64□□□□□ -1.67
VMP1Q96GC9 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.64□□□□□ -1.67
VMP1Q96GC9 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
VMP1Q96GC9 AL049539.1-201ENST00000611964 459 ntBASIC4.64□□□□□ -1.67
VMP1Q96GC9 AL445493.3-201ENST00000619568 477 ntBASIC4.64□□□□□ -1.67
VMP1Q96GC9 AC019206.1-201ENST00000621938 425 ntBASIC4.64□□□□□ -1.67
VMP1Q96GC9 AC092608.3-201ENST00000625017 386 ntBASIC4.64□□□□□ -1.67
VMP1Q96GC9 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
VMP1Q96GC9 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
VMP1Q96GC9 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.64□□□□□ -1.67
VMP1Q96GC9 AC108751.5-201ENST00000492880 1336 ntBASIC4.64□□□□□ -1.67
VMP1Q96GC9 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.64□□□□□ -1.67
VMP1Q96GC9 AC008432.1-201ENST00000615912 1320 ntBASIC4.64□□□□□ -1.67
VMP1Q96GC9 MFSD8-213ENST00000641134 1327 ntBASIC4.64□□□□□ -1.67
VMP1Q96GC9 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.64□□□□□ -1.67
VMP1Q96GC9 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VMP1Q96GC9 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
VMP1Q96GC9 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
VMP1Q96GC9 ECM1P2-201ENST00000503354 1577 ntBASIC4.63□□□□□ -1.67
VMP1Q96GC9 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.63□□□□□ -1.67
VMP1Q96GC9 RNA5SP28-201ENST00000363841 119 ntBASIC4.63□□□□□ -1.67
VMP1Q96GC9 RNU6-356P-201ENST00000384140 107 ntBASIC4.63□□□□□ -1.67
VMP1Q96GC9 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
VMP1Q96GC9 AL592291.1-201ENST00000403830 352 ntBASIC4.63□□□□□ -1.67
VMP1Q96GC9 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VMP1Q96GC9 AC009237.10-201ENST00000414112 510 ntBASIC4.63□□□□□ -1.67
VMP1Q96GC9 AF186996.5-201ENST00000418098 904 ntBASIC4.63□□□□□ -1.67
VMP1Q96GC9 OR2AM1P-201ENST00000422137 422 ntBASIC4.63□□□□□ -1.67
VMP1Q96GC9 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.63□□□□□ -1.67
VMP1Q96GC9 CKS1BP6-201ENST00000424932 240 ntBASIC4.63□□□□□ -1.67
VMP1Q96GC9 AL590762.4-201ENST00000425885 253 ntBASIC4.63□□□□□ -1.67
VMP1Q96GC9 AL732292.1-201ENST00000426692 226 ntBASIC4.63□□□□□ -1.67
VMP1Q96GC9 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.63□□□□□ -1.67
VMP1Q96GC9 FABP5P3-201ENST00000437960 408 ntBASIC4.63□□□□□ -1.67
VMP1Q96GC9 AC009263.1-201ENST00000441193 1239 ntBASIC4.63□□□□□ -1.67
VMP1Q96GC9 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.63□□□□□ -1.67
VMP1Q96GC9 AC112498.1-201ENST00000444401 332 ntBASIC4.63□□□□□ -1.67
VMP1Q96GC9 MRPL48P1-201ENST00000445390 636 ntBASIC4.63□□□□□ -1.67
VMP1Q96GC9 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4.63□□□□□ -1.67
VMP1Q96GC9 RHEBP2-201ENST00000450289 600 ntBASIC4.63□□□□□ -1.67
VMP1Q96GC9 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.63□□□□□ -1.67
VMP1Q96GC9 DNAJC19P8-201ENST00000452887 259 ntBASIC4.63□□□□□ -1.67
VMP1Q96GC9 RPL5P32-201ENST00000454085 879 ntBASIC4.63□□□□□ -1.67
VMP1Q96GC9 RPL7P16-201ENST00000479738 738 ntBASIC4.63□□□□□ -1.67
VMP1Q96GC9 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.63□□□□□ -1.67
VMP1Q96GC9 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.63□□□□□ -1.67
VMP1Q96GC9 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.63□□□□□ -1.67
VMP1Q96GC9 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.63□□□□□ -1.67
VMP1Q96GC9 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.63□□□□□ -1.67
VMP1Q96GC9 AC008033.2-201ENST00000542626 177 ntBASIC4.63□□□□□ -1.67
VMP1Q96GC9 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.63□□□□□ -1.67
VMP1Q96GC9 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.63□□□□□ -1.67
VMP1Q96GC9 AL049830.4-201ENST00000555149 351 ntBASIC4.63□□□□□ -1.67
VMP1Q96GC9 GLRXP2-201ENST00000555594 321 ntBASIC4.63□□□□□ -1.67
VMP1Q96GC9 RPL21P7-201ENST00000557463 483 ntBASIC4.63□□□□□ -1.67
VMP1Q96GC9 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.63□□□□□ -1.67
VMP1Q96GC9 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.63□□□□□ -1.67
VMP1Q96GC9 MIR3934-201ENST00000579806 107 ntBASIC4.63□□□□□ -1.67
VMP1Q96GC9 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC4.63□□□□□ -1.67
VMP1Q96GC9 AC008536.1-201ENST00000602872 669 ntBASIC4.63□□□□□ -1.67
VMP1Q96GC9 AC024940.4-201ENST00000605507 246 ntBASIC4.63□□□□□ -1.67
VMP1Q96GC9 RNA5SP108-201ENST00000605921 117 ntBASIC4.63□□□□□ -1.67
VMP1Q96GC9 AP001521.2-201ENST00000608772 546 ntBASIC4.63□□□□□ -1.67
VMP1Q96GC9 AC096586.1-201ENST00000610267 561 ntBASIC4.63□□□□□ -1.67
VMP1Q96GC9 AL445528.2-201ENST00000620582 470 ntBASIC4.63□□□□□ -1.67
VMP1Q96GC9 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.63□□□□□ -1.67
VMP1Q96GC9 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.63□□□□□ -1.67
VMP1Q96GC9 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.63□□□□□ -1.67
VMP1Q96GC9 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VMP1Q96GC9 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.63□□□□□ -1.67
VMP1Q96GC9 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.63□□□□□ -1.67
VMP1Q96GC9 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
VMP1Q96GC9 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VMP1Q96GC9 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.63□□□□□ -1.67
VMP1Q96GC9 NOL8P1-201ENST00000508336 3529 ntBASIC4.63□□□□□ -1.67
VMP1Q96GC9 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
VMP1Q96GC9 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
VMP1Q96GC9 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VMP1Q96GC9 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
VMP1Q96GC9 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
VMP1Q96GC9 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VMP1Q96GC9 SNORA73.1-201ENST00000363107 205 ntBASIC4.62□□□□□ -1.67
VMP1Q96GC9 SNORD56.4-201ENST00000363883 71 ntBASIC4.62□□□□□ -1.67
VMP1Q96GC9 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
VMP1Q96GC9 LRRC37BP1-201ENST00000398851 714 ntBASIC4.62□□□□□ -1.67
VMP1Q96GC9 BTBD10P2-201ENST00000404779 676 ntBASIC4.62□□□□□ -1.67
VMP1Q96GC9 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.62□□□□□ -1.67
VMP1Q96GC9 SNORA11C-201ENST00000408532 129 ntBASIC4.62□□□□□ -1.67
VMP1Q96GC9 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.62□□□□□ -1.67
VMP1Q96GC9 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms