Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 AC099842.1-201ENST00000619919 596 ntBASIC5.2□□□□□ -1.58
RNF31Q96EP0 AL607023.1-201ENST00000620045 248 ntBASIC5.2□□□□□ -1.58
RNF31Q96EP0 SAMMSON-209ENST00000641222 1100 ntBASIC5.2□□□□□ -1.58
RNF31Q96EP0 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
RNF31Q96EP0 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RNF31Q96EP0 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.2□□□□□ -1.58
RNF31Q96EP0 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RNF31Q96EP0 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.2□□□□□ -1.58
RNF31Q96EP0 AL603750.1-201ENST00000624216 1717 ntBASIC5.2□□□□□ -1.58
RNF31Q96EP0 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RNF31Q96EP0 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RNF31Q96EP0 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNF31Q96EP0 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNF31Q96EP0 HSPA8P14-201ENST00000552265 1805 ntBASIC5.19□□□□□ -1.58
RNF31Q96EP0 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNF31Q96EP0 AL672167.1-206ENST00000356293 943 ntBASIC5.19□□□□□ -1.58
RNF31Q96EP0 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.19□□□□□ -1.58
RNF31Q96EP0 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNF31Q96EP0 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNF31Q96EP0 RNU6-98P-201ENST00000384173 107 ntBASIC5.19□□□□□ -1.58
RNF31Q96EP0 MIR551A-201ENST00000385042 96 ntBASIC5.19□□□□□ -1.58
RNF31Q96EP0 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNF31Q96EP0 AC092745.2-202ENST00000411880 369 ntBASIC5.19□□□□□ -1.58
RNF31Q96EP0 AC022028.1-201ENST00000412054 408 ntBASIC5.19□□□□□ -1.58
RNF31Q96EP0 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.19□□□□□ -1.58
RNF31Q96EP0 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.19□□□□□ -1.58
RNF31Q96EP0 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNF31Q96EP0 SLC35E1P1-201ENST00000419313 864 ntBASIC5.19□□□□□ -1.58
RNF31Q96EP0 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC5.19□□□□□ -1.58
RNF31Q96EP0 RPL23AP4-201ENST00000427757 463 ntBASIC5.19□□□□□ -1.58
RNF31Q96EP0 AP001324.1-201ENST00000428553 399 ntBASIC5.19□□□□□ -1.58
RNF31Q96EP0 AL136231.1-201ENST00000429407 730 ntBASIC5.19□□□□□ -1.58
RNF31Q96EP0 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC5.19□□□□□ -1.58
RNF31Q96EP0 CDY14P-201ENST00000431260 1014 ntBASIC5.19□□□□□ -1.58
RNF31Q96EP0 TMEM183AP1-205ENST00000432739 290 ntBASIC5.19□□□□□ -1.58
RNF31Q96EP0 RPL7P29-201ENST00000437151 728 ntBASIC5.19□□□□□ -1.58
RNF31Q96EP0 AC009263.1-201ENST00000441193 1239 ntBASIC5.19□□□□□ -1.58
RNF31Q96EP0 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC5.19□□□□□ -1.58
RNF31Q96EP0 AC105399.1-202ENST00000447303 205 ntBASIC5.19□□□□□ -1.58
RNF31Q96EP0 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.19□□□□□ -1.58
RNF31Q96EP0 CDY23P-201ENST00000451661 1014 ntBASIC5.19□□□□□ -1.58
RNF31Q96EP0 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC5.19□□□□□ -1.58
RNF31Q96EP0 AC091685.2-201ENST00000454924 864 ntBASIC5.19□□□□□ -1.58
RNF31Q96EP0 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC5.19□□□□□ -1.58
RNF31Q96EP0 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC5.19□□□□□ -1.58
RNF31Q96EP0 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC5.19□□□□□ -1.58
RNF31Q96EP0 RPL7AP6-201ENST00000477943 801 ntBASIC5.19□□□□□ -1.58
RNF31Q96EP0 GAPDHP39-201ENST00000481866 979 ntBASIC5.19□□□□□ -1.58
RNF31Q96EP0 F11-205ENST00000492972 1204 ntTSL 2 BASIC5.19□□□□□ -1.58
RNF31Q96EP0 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RNF31Q96EP0 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.19□□□□□ -1.58
RNF31Q96EP0 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.19□□□□□ -1.58
RNF31Q96EP0 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC5.19□□□□□ -1.58
RNF31Q96EP0 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.19□□□□□ -1.58
RNF31Q96EP0 AC010460.1-201ENST00000507087 466 ntBASIC5.19□□□□□ -1.58
RNF31Q96EP0 CBX3P3-201ENST00000508108 532 ntBASIC5.19□□□□□ -1.58
RNF31Q96EP0 AC104108.1-201ENST00000509930 412 ntBASIC5.19□□□□□ -1.58
RNF31Q96EP0 LTV1P1-201ENST00000510683 1237 ntBASIC5.19□□□□□ -1.58
RNF31Q96EP0 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
RNF31Q96EP0 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.19□□□□□ -1.58
RNF31Q96EP0 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.19□□□□□ -1.58
RNF31Q96EP0 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RNF31Q96EP0 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.19□□□□□ -1.58
RNF31Q96EP0 AP002963.1-201ENST00000530590 184 ntBASIC5.19□□□□□ -1.58
RNF31Q96EP0 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RNF31Q96EP0 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
RNF31Q96EP0 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.19□□□□□ -1.58
RNF31Q96EP0 AC018552.1-201ENST00000562099 811 ntBASIC5.19□□□□□ -1.58
RNF31Q96EP0 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.19□□□□□ -1.58
RNF31Q96EP0 OR1F2P-201ENST00000570470 933 ntBASIC5.19□□□□□ -1.58
RNF31Q96EP0 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC5.19□□□□□ -1.58
RNF31Q96EP0 MIR3611-201ENST00000584484 83 ntBASIC5.19□□□□□ -1.58
RNF31Q96EP0 AL135786.2-201ENST00000608422 615 ntBASIC5.19□□□□□ -1.58
RNF31Q96EP0 MIR6133-201ENST00000617057 108 ntBASIC5.19□□□□□ -1.58
RNF31Q96EP0 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RNF31Q96EP0 GTF2H2B-203ENST00000508065 1432 ntBASIC5.19□□□□□ -1.58
RNF31Q96EP0 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNF31Q96EP0 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNF31Q96EP0 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
RNF31Q96EP0 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNF31Q96EP0 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RNF31Q96EP0 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNF31Q96EP0 UGT2B26P-201ENST00000508672 1613 ntBASIC5.19□□□□□ -1.58
RNF31Q96EP0 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNF31Q96EP0 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
RNF31Q96EP0 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RNF31Q96EP0 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RNF31Q96EP0 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RNF31Q96EP0 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RNF31Q96EP0 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RNF31Q96EP0 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RNF31Q96EP0 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.18□□□□□ -1.58
RNF31Q96EP0 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
RNF31Q96EP0 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.18□□□□□ -1.58
RNF31Q96EP0 Y_RNA.3-201ENST00000362331 103 ntBASIC5.18□□□□□ -1.58
RNF31Q96EP0 RNU6-500P-201ENST00000362349 107 ntBASIC5.18□□□□□ -1.58
RNF31Q96EP0 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC5.18□□□□□ -1.58
RNF31Q96EP0 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RNF31Q96EP0 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.18□□□□□ -1.58
RNF31Q96EP0 RNA5SP339-201ENST00000390987 122 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms