Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC6.41□□□□□ -1.38
TOPBP1Q92547 AC017083.1-201ENST00000428093 483 ntBASIC6.41□□□□□ -1.38
TOPBP1Q92547 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TOPBP1Q92547 SNORD105B-201ENST00000458770 79 ntBASIC6.41□□□□□ -1.38
TOPBP1Q92547 AP001486.1-201ENST00000463339 476 ntBASIC6.41□□□□□ -1.38
TOPBP1Q92547 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC6.41□□□□□ -1.38
TOPBP1Q92547 AC012158.1-204ENST00000483430 465 ntBASIC6.41□□□□□ -1.38
TOPBP1Q92547 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC6.41□□□□□ -1.38
TOPBP1Q92547 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC6.41□□□□□ -1.38
TOPBP1Q92547 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC6.41□□□□□ -1.38
TOPBP1Q92547 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC6.41□□□□□ -1.38
TOPBP1Q92547 YPEL5P2-201ENST00000605553 359 ntBASIC6.41□□□□□ -1.38
TOPBP1Q92547 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC6.41□□□□□ -1.38
TOPBP1Q92547 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC6.41□□□□□ -1.38
TOPBP1Q92547 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TOPBP1Q92547 CDY11P-201ENST00000447168 1651 ntBASIC6.41□□□□□ -1.38
TOPBP1Q92547 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC6.41□□□□□ -1.38
TOPBP1Q92547 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
TOPBP1Q92547 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC6.41□□□□□ -1.38
TOPBP1Q92547 AC067945.1-201ENST00000342609 618 ntBASIC6.4□□□□□ -1.38
TOPBP1Q92547 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC6.4□□□□□ -1.38
TOPBP1Q92547 RPL21P110-201ENST00000433345 446 ntBASIC6.4□□□□□ -1.38
TOPBP1Q92547 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC6.4□□□□□ -1.38
TOPBP1Q92547 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC6.4□□□□□ -1.38
TOPBP1Q92547 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC6.4□□□□□ -1.38
TOPBP1Q92547 AC138938.1-201ENST00000515431 782 ntBASIC6.4□□□□□ -1.38
TOPBP1Q92547 RANP9-201ENST00000519957 271 ntBASIC6.4□□□□□ -1.38
TOPBP1Q92547 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC6.4□□□□□ -1.38
TOPBP1Q92547 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC6.4□□□□□ -1.38
TOPBP1Q92547 MIR6852-201ENST00000621699 66 ntBASIC6.4□□□□□ -1.38
TOPBP1Q92547 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
TOPBP1Q92547 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
TOPBP1Q92547 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
TOPBP1Q92547 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC6.4□□□□□ -1.39
TOPBP1Q92547 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
TOPBP1Q92547 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
TOPBP1Q92547 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
TOPBP1Q92547 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.39
TOPBP1Q92547 RPL7AP73-201ENST00000413490 353 ntBASIC6.4□□□□□ -1.39
TOPBP1Q92547 AC073063.1-201ENST00000434352 607 ntBASIC6.4□□□□□ -1.39
TOPBP1Q92547 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
TOPBP1Q92547 AL591473.1-201ENST00000464297 313 ntBASIC6.4□□□□□ -1.39
TOPBP1Q92547 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC6.4□□□□□ -1.39
TOPBP1Q92547 RAC1P2-201ENST00000511164 579 ntBASIC6.4□□□□□ -1.39
TOPBP1Q92547 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
TOPBP1Q92547 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC6.4□□□□□ -1.39
TOPBP1Q92547 AC016839.1-201ENST00000578162 867 ntBASIC6.4□□□□□ -1.39
TOPBP1Q92547 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC6.4□□□□□ -1.39
TOPBP1Q92547 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC6.4□□□□□ -1.39
TOPBP1Q92547 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC6.4□□□□□ -1.39
TOPBP1Q92547 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TOPBP1Q92547 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC6.39□□□□□ -1.39
TOPBP1Q92547 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
TOPBP1Q92547 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC6.39□□□□□ -1.39
TOPBP1Q92547 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC6.39□□□□□ -1.39
TOPBP1Q92547 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
TOPBP1Q92547 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TOPBP1Q92547 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
TOPBP1Q92547 SNORA3C-201ENST00000408792 125 ntBASIC6.39□□□□□ -1.39
TOPBP1Q92547 AL512649.1-201ENST00000428997 581 ntBASIC6.39□□□□□ -1.39
TOPBP1Q92547 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC6.39□□□□□ -1.39
TOPBP1Q92547 UBE2DNL-203ENST00000474922 222 ntBASIC6.39□□□□□ -1.39
TOPBP1Q92547 RN7SL809P-201ENST00000482040 297 ntBASIC6.39□□□□□ -1.39
TOPBP1Q92547 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC6.39□□□□□ -1.39
TOPBP1Q92547 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC6.39□□□□□ -1.39
TOPBP1Q92547 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC6.39□□□□□ -1.39
TOPBP1Q92547 AC069240.1-201ENST00000548774 375 ntBASIC6.39□□□□□ -1.39
TOPBP1Q92547 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC6.39□□□□□ -1.39
TOPBP1Q92547 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.39□□□□□ -1.39
TOPBP1Q92547 AC097505.1-201ENST00000610199 565 ntBASIC6.39□□□□□ -1.39
TOPBP1Q92547 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TOPBP1Q92547 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
TOPBP1Q92547 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TOPBP1Q92547 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TOPBP1Q92547 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.38□□□□□ -1.39
TOPBP1Q92547 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TOPBP1Q92547 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
TOPBP1Q92547 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC6.38□□□□□ -1.39
TOPBP1Q92547 AC073335.1-201ENST00000427776 363 ntBASIC6.38□□□□□ -1.39
TOPBP1Q92547 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC6.38□□□□□ -1.39
TOPBP1Q92547 SETD6P1-201ENST00000444575 317 ntBASIC6.38□□□□□ -1.39
TOPBP1Q92547 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC6.38□□□□□ -1.39
TOPBP1Q92547 AC006517.1-201ENST00000480485 328 ntBASIC6.38□□□□□ -1.39
TOPBP1Q92547 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TOPBP1Q92547 MIR4513-201ENST00000581077 86 ntBASIC6.38□□□□□ -1.39
TOPBP1Q92547 MIR3124-201ENST00000582636 67 ntBASIC6.38□□□□□ -1.39
TOPBP1Q92547 AC015871.5-202ENST00000623252 701 ntBASIC6.38□□□□□ -1.39
TOPBP1Q92547 Z95327.2-201ENST00000414579 1873 ntBASIC6.38□□□□□ -1.39
TOPBP1Q92547 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TOPBP1Q92547 AL365440.1-201ENST00000436135 2167 ntBASIC6.38□□□□□ -1.39
TOPBP1Q92547 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TOPBP1Q92547 FTX-210ENST00000603037 8347 ntTSL 5 BASIC6.37□□□□□ -1.39
TOPBP1Q92547 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TOPBP1Q92547 AL137918.1-201ENST00000624542 1922 ntBASIC6.37□□□□□ -1.39
TOPBP1Q92547 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC6.37□□□□□ -1.39
TOPBP1Q92547 RNU6-1279P-201ENST00000383917 103 ntBASIC6.37□□□□□ -1.39
TOPBP1Q92547 HMGB1P37-201ENST00000439613 609 ntBASIC6.37□□□□□ -1.39
TOPBP1Q92547 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
TOPBP1Q92547 RN7SL271P-201ENST00000487601 295 ntBASIC6.37□□□□□ -1.39
TOPBP1Q92547 SNORA70.18-201ENST00000516696 98 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms