Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AC090695.1-201ENST00000561269 1222 ntBASIC5.01□□□□□ -1.61
HMGB4Q8WW32 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.01□□□□□ -1.61
HMGB4Q8WW32 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC5.01□□□□□ -1.61
HMGB4Q8WW32 AP001269.3-201ENST00000588718 329 ntBASIC5.01□□□□□ -1.61
HMGB4Q8WW32 AC091057.2-201ENST00000602594 792 ntBASIC5.01□□□□□ -1.61
HMGB4Q8WW32 PSMA6P4-201ENST00000603247 718 ntBASIC5.01□□□□□ -1.61
HMGB4Q8WW32 AC021749.1-201ENST00000604322 607 ntBASIC5.01□□□□□ -1.61
HMGB4Q8WW32 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.01□□□□□ -1.61
HMGB4Q8WW32 Z95327.3-201ENST00000610385 572 ntBASIC5.01□□□□□ -1.61
HMGB4Q8WW32 AC009704.2-201ENST00000618739 483 ntBASIC5.01□□□□□ -1.61
HMGB4Q8WW32 MIR6839-201ENST00000620425 113 ntBASIC5.01□□□□□ -1.61
HMGB4Q8WW32 AC019206.1-201ENST00000621938 425 ntBASIC5.01□□□□□ -1.61
HMGB4Q8WW32 AP002967.1-201ENST00000624203 539 ntBASIC5.01□□□□□ -1.61
HMGB4Q8WW32 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.01□□□□□ -1.61
HMGB4Q8WW32 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC5.01□□□□□ -1.61
HMGB4Q8WW32 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
HMGB4Q8WW32 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
HMGB4Q8WW32 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.01□□□□□ -1.61
HMGB4Q8WW32 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HMGB4Q8WW32 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.01□□□□□ -1.61
HMGB4Q8WW32 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HMGB4Q8WW32 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HMGB4Q8WW32 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.01□□□□□ -1.61
HMGB4Q8WW32 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
HMGB4Q8WW32 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.01□□□□□ -1.61
HMGB4Q8WW32 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.01□□□□□ -1.61
HMGB4Q8WW32 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HMGB4Q8WW32 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HMGB4Q8WW32 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
HMGB4Q8WW32 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
HMGB4Q8WW32 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
HMGB4Q8WW32 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5□□□□□ -1.61
HMGB4Q8WW32 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
HMGB4Q8WW32 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
HMGB4Q8WW32 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5□□□□□ -1.61
HMGB4Q8WW32 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
HMGB4Q8WW32 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5□□□□□ -1.61
HMGB4Q8WW32 AC126755.2-208ENST00000327792 462 ntBASIC5□□□□□ -1.61
HMGB4Q8WW32 AC138969.1-213ENST00000331436 462 ntBASIC5□□□□□ -1.61
HMGB4Q8WW32 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HMGB4Q8WW32 RPL32P3-201ENST00000359025 275 ntBASIC5□□□□□ -1.61
HMGB4Q8WW32 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
HMGB4Q8WW32 RNU6-413P-201ENST00000384115 107 ntBASIC5□□□□□ -1.61
HMGB4Q8WW32 AC119751.3-201ENST00000399720 670 ntBASIC5□□□□□ -1.61
HMGB4Q8WW32 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5□□□□□ -1.61
HMGB4Q8WW32 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5□□□□□ -1.61
HMGB4Q8WW32 ELOCP9-201ENST00000418624 239 ntBASIC5□□□□□ -1.61
HMGB4Q8WW32 RPL7AP49-201ENST00000429522 581 ntBASIC5□□□□□ -1.61
HMGB4Q8WW32 AL591438.1-201ENST00000433508 581 ntBASIC5□□□□□ -1.61
HMGB4Q8WW32 MTCO2P20-201ENST00000437339 673 ntBASIC5□□□□□ -1.61
HMGB4Q8WW32 MTCYBP31-201ENST00000438855 1122 ntBASIC5□□□□□ -1.61
HMGB4Q8WW32 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC5□□□□□ -1.61
HMGB4Q8WW32 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5□□□□□ -1.61
HMGB4Q8WW32 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC5□□□□□ -1.61
HMGB4Q8WW32 Z77249.1-201ENST00000444622 1175 ntBASIC5□□□□□ -1.61
HMGB4Q8WW32 ANKRD30BP3-201ENST00000444850 1070 ntBASIC5□□□□□ -1.61
HMGB4Q8WW32 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5□□□□□ -1.61
HMGB4Q8WW32 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HMGB4Q8WW32 RPL37P3-201ENST00000456825 293 ntBASIC5□□□□□ -1.61
HMGB4Q8WW32 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5□□□□□ -1.61
HMGB4Q8WW32 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC5□□□□□ -1.61
HMGB4Q8WW32 AC084024.2-201ENST00000503480 791 ntBASIC5□□□□□ -1.61
HMGB4Q8WW32 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC5□□□□□ -1.61
HMGB4Q8WW32 AC008494.2-201ENST00000514544 370 ntBASIC5□□□□□ -1.61
HMGB4Q8WW32 MTATP6P15-201ENST00000527233 835 ntBASIC5□□□□□ -1.61
HMGB4Q8WW32 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5□□□□□ -1.61
HMGB4Q8WW32 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC5□□□□□ -1.61
HMGB4Q8WW32 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC5□□□□□ -1.61
HMGB4Q8WW32 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5□□□□□ -1.61
HMGB4Q8WW32 TVP23CP2-201ENST00000571473 623 ntBASIC5□□□□□ -1.61
HMGB4Q8WW32 BPTFP1-201ENST00000579209 492 ntBASIC5□□□□□ -1.61
HMGB4Q8WW32 NIFKP6-201ENST00000598115 845 ntBASIC5□□□□□ -1.61
HMGB4Q8WW32 AL137072.1-201ENST00000603444 466 ntBASIC5□□□□□ -1.61
HMGB4Q8WW32 AC002069.2-201ENST00000603580 883 ntBASIC5□□□□□ -1.61
HMGB4Q8WW32 AC025811.1-201ENST00000604312 472 ntBASIC5□□□□□ -1.61
HMGB4Q8WW32 AC024257.5-201ENST00000612739 531 ntBASIC5□□□□□ -1.61
HMGB4Q8WW32 AC120349.3-201ENST00000624377 529 ntBASIC5□□□□□ -1.61
HMGB4Q8WW32 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5□□□□□ -1.61
HMGB4Q8WW32 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HMGB4Q8WW32 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5□□□□□ -1.61
HMGB4Q8WW32 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
HMGB4Q8WW32 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5□□□□□ -1.61
HMGB4Q8WW32 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HMGB4Q8WW32 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5□□□□□ -1.61
HMGB4Q8WW32 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
HMGB4Q8WW32 ZNF876P-202ENST00000398732 1485 ntBASIC5□□□□□ -1.61
HMGB4Q8WW32 OFD1P9Y-201ENST00000417699 1491 ntBASIC5□□□□□ -1.61
HMGB4Q8WW32 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HMGB4Q8WW32 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
HMGB4Q8WW32 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5□□□□□ -1.61
HMGB4Q8WW32 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
HMGB4Q8WW32 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.99□□□□□ -1.61
HMGB4Q8WW32 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.99□□□□□ -1.61
HMGB4Q8WW32 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HMGB4Q8WW32 AC019072.1-201ENST00000604535 1551 ntBASIC4.99□□□□□ -1.61
HMGB4Q8WW32 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
HMGB4Q8WW32 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
HMGB4Q8WW32 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HMGB4Q8WW32 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.99□□□□□ -1.61
HMGB4Q8WW32 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms