Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 AC093424.1-201ENST00000604999 338 ntBASIC4.51□□□□□ -1.69
BEST3Q8N1M1 AL122125.1-201ENST00000616999 600 ntBASIC4.51□□□□□ -1.69
BEST3Q8N1M1 AC015914.2-201ENST00000618167 288 ntBASIC4.51□□□□□ -1.69
BEST3Q8N1M1 BX005214.3-202ENST00000619809 325 ntBASIC4.51□□□□□ -1.69
BEST3Q8N1M1 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.51□□□□□ -1.69
BEST3Q8N1M1 AC017104.5-201ENST00000637647 639 ntBASIC4.51□□□□□ -1.69
BEST3Q8N1M1 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
BEST3Q8N1M1 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
BEST3Q8N1M1 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.51□□□□□ -1.69
BEST3Q8N1M1 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.51□□□□□ -1.69
BEST3Q8N1M1 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.51□□□□□ -1.69
BEST3Q8N1M1 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
BEST3Q8N1M1 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.51□□□□□ -1.69
BEST3Q8N1M1 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
BEST3Q8N1M1 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
BEST3Q8N1M1 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
BEST3Q8N1M1 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
BEST3Q8N1M1 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.5□□□□□ -1.69
BEST3Q8N1M1 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.5□□□□□ -1.69
BEST3Q8N1M1 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
BEST3Q8N1M1 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
BEST3Q8N1M1 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
BEST3Q8N1M1 RNU6-249P-201ENST00000363016 102 ntBASIC4.5□□□□□ -1.69
BEST3Q8N1M1 RNU4-68P-201ENST00000364314 141 ntBASIC4.5□□□□□ -1.69
BEST3Q8N1M1 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
BEST3Q8N1M1 RNU6-398P-201ENST00000384143 109 ntBASIC4.5□□□□□ -1.69
BEST3Q8N1M1 SNORD116-12-201ENST00000384468 92 ntBASIC4.5□□□□□ -1.69
BEST3Q8N1M1 AC013442.1-201ENST00000397347 228 ntBASIC4.5□□□□□ -1.69
BEST3Q8N1M1 AL357515.1-201ENST00000402967 542 ntBASIC4.5□□□□□ -1.69
BEST3Q8N1M1 RPS16P5-201ENST00000406501 404 ntBASIC4.5□□□□□ -1.69
BEST3Q8N1M1 SNORA11C-201ENST00000408532 129 ntBASIC4.5□□□□□ -1.69
BEST3Q8N1M1 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.5□□□□□ -1.69
BEST3Q8N1M1 HIGD1AP15-201ENST00000416198 280 ntBASIC4.5□□□□□ -1.69
BEST3Q8N1M1 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.5□□□□□ -1.69
BEST3Q8N1M1 AC245028.1-201ENST00000423259 256 ntBASIC4.5□□□□□ -1.69
BEST3Q8N1M1 AC012519.1-201ENST00000424588 610 ntBASIC4.5□□□□□ -1.69
BEST3Q8N1M1 OR2B7P-201ENST00000429302 934 ntBASIC4.5□□□□□ -1.69
BEST3Q8N1M1 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.5□□□□□ -1.69
BEST3Q8N1M1 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.5□□□□□ -1.69
BEST3Q8N1M1 AL138878.2-201ENST00000440581 1241 ntBASIC4.5□□□□□ -1.69
BEST3Q8N1M1 FHP1-201ENST00000442741 703 ntBASIC4.5□□□□□ -1.69
BEST3Q8N1M1 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.5□□□□□ -1.69
BEST3Q8N1M1 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.5□□□□□ -1.69
BEST3Q8N1M1 AL031584.1-201ENST00000447169 754 ntBASIC4.5□□□□□ -1.69
BEST3Q8N1M1 AL589880.1-201ENST00000448271 287 ntBASIC4.5□□□□□ -1.69
BEST3Q8N1M1 ZNF736P8Y-201ENST00000451913 669 ntBASIC4.5□□□□□ -1.69
BEST3Q8N1M1 PTGES3P5-201ENST00000455109 434 ntBASIC4.5□□□□□ -1.69
BEST3Q8N1M1 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.5□□□□□ -1.69
BEST3Q8N1M1 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.5□□□□□ -1.69
BEST3Q8N1M1 AC021146.5-201ENST00000503544 545 ntBASIC4.5□□□□□ -1.69
BEST3Q8N1M1 AC114322.1-201ENST00000506771 926 ntBASIC4.5□□□□□ -1.69
BEST3Q8N1M1 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.5□□□□□ -1.69
BEST3Q8N1M1 PRELID3BP5-201ENST00000508612 460 ntBASIC4.5□□□□□ -1.69
BEST3Q8N1M1 RN7SKP46-201ENST00000515942 234 ntBASIC4.5□□□□□ -1.69
BEST3Q8N1M1 RN7SKP276-201ENST00000516242 268 ntBASIC4.5□□□□□ -1.69
BEST3Q8N1M1 snoZ278.1-201ENST00000517059 112 ntBASIC4.5□□□□□ -1.69
BEST3Q8N1M1 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.5□□□□□ -1.69
BEST3Q8N1M1 AP006289.1-201ENST00000538089 277 ntBASIC4.5□□□□□ -1.69
BEST3Q8N1M1 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.5□□□□□ -1.69
BEST3Q8N1M1 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
BEST3Q8N1M1 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
BEST3Q8N1M1 AC068714.1-201ENST00000559623 800 ntBASIC4.5□□□□□ -1.69
BEST3Q8N1M1 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC4.5□□□□□ -1.69
BEST3Q8N1M1 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.5□□□□□ -1.69
BEST3Q8N1M1 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.5□□□□□ -1.69
BEST3Q8N1M1 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.5□□□□□ -1.69
BEST3Q8N1M1 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.5□□□□□ -1.69
BEST3Q8N1M1 AC011453.2-201ENST00000603737 729 ntBASIC4.5□□□□□ -1.69
BEST3Q8N1M1 AL035411.2-201ENST00000604022 421 ntBASIC4.5□□□□□ -1.69
BEST3Q8N1M1 AC087683.2-201ENST00000611384 326 ntBASIC4.5□□□□□ -1.69
BEST3Q8N1M1 AL138478.1-201ENST00000612252 832 ntBASIC4.5□□□□□ -1.69
BEST3Q8N1M1 AC023509.5-201ENST00000617434 807 ntBASIC4.5□□□□□ -1.69
BEST3Q8N1M1 OR1S1-201ENST00000624470 978 ntBASIC4.5□□□□□ -1.69
BEST3Q8N1M1 AC016717.3-201ENST00000624730 554 ntBASIC4.5□□□□□ -1.69
BEST3Q8N1M1 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.5□□□□□ -1.69
BEST3Q8N1M1 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.5□□□□□ -1.69
BEST3Q8N1M1 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
BEST3Q8N1M1 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.5□□□□□ -1.69
BEST3Q8N1M1 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
BEST3Q8N1M1 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
BEST3Q8N1M1 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.5□□□□□ -1.69
BEST3Q8N1M1 MAPK10-320ENST00000641462 6696 ntBASIC4.49□□□□□ -1.69
BEST3Q8N1M1 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.49□□□□□ -1.69
BEST3Q8N1M1 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.49□□□□□ -1.69
BEST3Q8N1M1 SUCLA2P2-201ENST00000417269 1309 ntBASIC4.49□□□□□ -1.69
BEST3Q8N1M1 AC104446.1-201ENST00000613728 1321 ntBASIC4.49□□□□□ -1.69
BEST3Q8N1M1 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.49□□□□□ -1.69
BEST3Q8N1M1 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
BEST3Q8N1M1 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.49□□□□□ -1.69
BEST3Q8N1M1 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
BEST3Q8N1M1 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.49□□□□□ -1.69
BEST3Q8N1M1 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
BEST3Q8N1M1 MFSD8-220ENST00000641243 1422 ntBASIC4.49□□□□□ -1.69
BEST3Q8N1M1 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.49□□□□□ -1.69
BEST3Q8N1M1 RNU1-87P-201ENST00000363727 170 ntBASIC4.49□□□□□ -1.69
BEST3Q8N1M1 RNA5SP505-201ENST00000364748 108 ntBASIC4.49□□□□□ -1.69
BEST3Q8N1M1 RNU6-304P-201ENST00000364855 107 ntBASIC4.49□□□□□ -1.69
BEST3Q8N1M1 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.49□□□□□ -1.69
BEST3Q8N1M1 AL136310.1-201ENST00000404926 654 ntBASIC4.49□□□□□ -1.69
BEST3Q8N1M1 RNU6-77P-201ENST00000410554 91 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms