Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 VTA1P2-201ENST00000520205 911 ntBASIC4.43□□□□□ -1.7
CCDC50Q8IVM0 AC090819.1-201ENST00000523800 1111 ntBASIC4.43□□□□□ -1.7
CCDC50Q8IVM0 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC50Q8IVM0 NPM1P35-201ENST00000533043 868 ntBASIC4.43□□□□□ -1.7
CCDC50Q8IVM0 OR8X1P-201ENST00000534542 869 ntBASIC4.43□□□□□ -1.7
CCDC50Q8IVM0 RFPL1S-203ENST00000539579 330 ntBASIC4.43□□□□□ -1.7
CCDC50Q8IVM0 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.43□□□□□ -1.7
CCDC50Q8IVM0 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC50Q8IVM0 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC50Q8IVM0 AC090515.3-201ENST00000560431 315 ntBASIC4.43□□□□□ -1.7
CCDC50Q8IVM0 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.43□□□□□ -1.7
CCDC50Q8IVM0 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC50Q8IVM0 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
CCDC50Q8IVM0 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC50Q8IVM0 MIR486-1-201ENST00000612171 68 ntBASIC4.43□□□□□ -1.7
CCDC50Q8IVM0 MIR7702-201ENST00000621931 59 ntBASIC4.43□□□□□ -1.7
CCDC50Q8IVM0 AC008785.1-201ENST00000624475 456 ntBASIC4.43□□□□□ -1.7
CCDC50Q8IVM0 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC50Q8IVM0 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC50Q8IVM0 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC50Q8IVM0 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CCDC50Q8IVM0 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC50Q8IVM0 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC50Q8IVM0 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC50Q8IVM0 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CCDC50Q8IVM0 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC50Q8IVM0 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC50Q8IVM0 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CCDC50Q8IVM0 AC079741.1-201ENST00000321498 212 ntBASIC4.42□□□□□ -1.7
CCDC50Q8IVM0 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CCDC50Q8IVM0 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC50Q8IVM0 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC50Q8IVM0 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC50Q8IVM0 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC50Q8IVM0 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC50Q8IVM0 AC099336.2-201ENST00000422457 254 ntBASIC4.42□□□□□ -1.7
CCDC50Q8IVM0 AL356806.1-201ENST00000422524 916 ntBASIC4.42□□□□□ -1.7
CCDC50Q8IVM0 BRWD1P3-201ENST00000428816 390 ntBASIC4.42□□□□□ -1.7
CCDC50Q8IVM0 AL606490.8-201ENST00000441624 319 ntBASIC4.42□□□□□ -1.7
CCDC50Q8IVM0 FHP1-201ENST00000442741 703 ntBASIC4.42□□□□□ -1.7
CCDC50Q8IVM0 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC50Q8IVM0 EIF4A1P11-201ENST00000451239 222 ntBASIC4.42□□□□□ -1.7
CCDC50Q8IVM0 AL513533.1-201ENST00000453728 415 ntBASIC4.42□□□□□ -1.7
CCDC50Q8IVM0 AC099560.2-201ENST00000457554 255 ntBASIC4.42□□□□□ -1.7
CCDC50Q8IVM0 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC50Q8IVM0 RPL5P13-201ENST00000462840 709 ntBASIC4.42□□□□□ -1.7
CCDC50Q8IVM0 AC006517.1-201ENST00000480485 328 ntBASIC4.42□□□□□ -1.7
CCDC50Q8IVM0 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.42□□□□□ -1.7
CCDC50Q8IVM0 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.42□□□□□ -1.7
CCDC50Q8IVM0 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC50Q8IVM0 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.42□□□□□ -1.7
CCDC50Q8IVM0 HSPD1P11-201ENST00000508643 1702 ntBASIC4.42□□□□□ -1.7
CCDC50Q8IVM0 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC50Q8IVM0 RN7SKP92-201ENST00000517266 244 ntBASIC4.42□□□□□ -1.7
CCDC50Q8IVM0 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.42□□□□□ -1.7
CCDC50Q8IVM0 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC50Q8IVM0 AC068446.3-201ENST00000555285 382 ntBASIC4.42□□□□□ -1.7
CCDC50Q8IVM0 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CCDC50Q8IVM0 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC50Q8IVM0 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC50Q8IVM0 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC50Q8IVM0 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC50Q8IVM0 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC50Q8IVM0 AC008013.2-202ENST00000637965 364 ntBASIC4.42□□□□□ -1.7
CCDC50Q8IVM0 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC50Q8IVM0 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
CCDC50Q8IVM0 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC50Q8IVM0 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CCDC50Q8IVM0 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC50Q8IVM0 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC50Q8IVM0 AL132640.2-201ENST00000559968 1698 ntBASIC4.41□□□□□ -1.7
CCDC50Q8IVM0 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.41□□□□□ -1.7
CCDC50Q8IVM0 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC50Q8IVM0 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
CCDC50Q8IVM0 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC50Q8IVM0 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CCDC50Q8IVM0 MIR421-201ENST00000365696 85 ntBASIC4.41□□□□□ -1.7
CCDC50Q8IVM0 MIR129-1-201ENST00000384972 72 ntBASIC4.41□□□□□ -1.7
CCDC50Q8IVM0 CYB5AP4-201ENST00000396692 399 ntBASIC4.41□□□□□ -1.7
CCDC50Q8IVM0 RPL23AP59-201ENST00000399415 461 ntBASIC4.41□□□□□ -1.7
CCDC50Q8IVM0 AL133270.1-201ENST00000402635 279 ntBASIC4.41□□□□□ -1.7
CCDC50Q8IVM0 AP000357.1-201ENST00000409926 1165 ntBASIC4.41□□□□□ -1.7
CCDC50Q8IVM0 RNA5SP36-201ENST00000410197 133 ntBASIC4.41□□□□□ -1.7
CCDC50Q8IVM0 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.41□□□□□ -1.7
CCDC50Q8IVM0 AC119751.6-201ENST00000416712 186 ntBASIC4.41□□□□□ -1.7
CCDC50Q8IVM0 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.41□□□□□ -1.7
CCDC50Q8IVM0 MFSD13B-201ENST00000420133 1290 ntBASIC4.41□□□□□ -1.7
CCDC50Q8IVM0 RPL23AP1-201ENST00000428990 471 ntBASIC4.41□□□□□ -1.7
CCDC50Q8IVM0 LYPLA1P1-201ENST00000434514 622 ntBASIC4.41□□□□□ -1.7
CCDC50Q8IVM0 AL353597.2-202ENST00000434901 373 ntBASIC4.41□□□□□ -1.7
CCDC50Q8IVM0 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC50Q8IVM0 MTCYBP29-201ENST00000436327 1006 ntBASIC4.41□□□□□ -1.7
CCDC50Q8IVM0 TPTE2P3-201ENST00000441562 1189 ntBASIC4.41□□□□□ -1.7
CCDC50Q8IVM0 AL512326.1-201ENST00000443050 721 ntBASIC4.41□□□□□ -1.7
CCDC50Q8IVM0 YWHAQP9-201ENST00000445891 512 ntBASIC4.41□□□□□ -1.7
CCDC50Q8IVM0 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC50Q8IVM0 RPL23AP81-201ENST00000455252 467 ntBASIC4.41□□□□□ -1.7
CCDC50Q8IVM0 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.41□□□□□ -1.7
CCDC50Q8IVM0 AC104629.2-201ENST00000468627 598 ntBASIC4.41□□□□□ -1.7
CCDC50Q8IVM0 AC069499.1-201ENST00000489433 509 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms