Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.85□□□□□ -1.79
RIF1Q5UIP0 FCF1-203ENST00000553615 954 ntTSL 3 BASIC3.85□□□□□ -1.79
RIF1Q5UIP0 AC034105.3-201ENST00000565294 442 ntBASIC3.85□□□□□ -1.79
RIF1Q5UIP0 MIR3945-201ENST00000581853 98 ntBASIC3.85□□□□□ -1.79
RIF1Q5UIP0 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.85□□□□□ -1.79
RIF1Q5UIP0 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.85□□□□□ -1.79
RIF1Q5UIP0 AC005520.3-201ENST00000602874 370 ntBASIC3.85□□□□□ -1.79
RIF1Q5UIP0 RNU1-30P-201ENST00000606575 163 ntBASIC3.85□□□□□ -1.79
RIF1Q5UIP0 CROT-204ENST00000442291 1993 ntTSL 5 BASIC3.85□□□□□ -1.79
RIF1Q5UIP0 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.85□□□□□ -1.79
RIF1Q5UIP0 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC3.85□□□□□ -1.79
RIF1Q5UIP0 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
RIF1Q5UIP0 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RIF1Q5UIP0 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC3.84□□□□□ -1.79
RIF1Q5UIP0 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RIF1Q5UIP0 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC3.84□□□□□ -1.79
RIF1Q5UIP0 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
RIF1Q5UIP0 GNG5P1-201ENST00000255500 204 ntBASIC3.84□□□□□ -1.79
RIF1Q5UIP0 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.84□□□□□ -1.79
RIF1Q5UIP0 RPL21P10-201ENST00000463521 490 ntBASIC3.84□□□□□ -1.79
RIF1Q5UIP0 RPL7L1P13-201ENST00000511702 739 ntBASIC3.84□□□□□ -1.79
RIF1Q5UIP0 CASC19-203ENST00000523510 575 ntTSL 3 BASIC3.84□□□□□ -1.79
RIF1Q5UIP0 AC090246.1-201ENST00000616499 426 ntBASIC3.84□□□□□ -1.79
RIF1Q5UIP0 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC3.84□□□□□ -1.79
RIF1Q5UIP0 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC3.84□□□□□ -1.79
RIF1Q5UIP0 AC119744.1-201ENST00000454746 1715 ntBASIC3.84□□□□□ -1.79
RIF1Q5UIP0 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.79
RIF1Q5UIP0 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
RIF1Q5UIP0 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RIF1Q5UIP0 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RIF1Q5UIP0 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
RIF1Q5UIP0 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.84□□□□□ -1.79
RIF1Q5UIP0 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC3.84□□□□□ -1.79
RIF1Q5UIP0 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
RIF1Q5UIP0 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
RIF1Q5UIP0 OR6K3-202ENST00000368146 996 ntBASIC3.84□□□□□ -1.8
RIF1Q5UIP0 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
RIF1Q5UIP0 RNA5SP120-201ENST00000410900 112 ntBASIC3.84□□□□□ -1.8
RIF1Q5UIP0 RPL27AP5-201ENST00000469428 449 ntBASIC3.84□□□□□ -1.8
RIF1Q5UIP0 AC010285.3-201ENST00000511668 676 ntBASIC3.84□□□□□ -1.8
RIF1Q5UIP0 AC023141.12-201ENST00000512399 199 ntBASIC3.84□□□□□ -1.8
RIF1Q5UIP0 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.84□□□□□ -1.8
RIF1Q5UIP0 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC3.84□□□□□ -1.8
RIF1Q5UIP0 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.84□□□□□ -1.8
RIF1Q5UIP0 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.84□□□□□ -1.8
RIF1Q5UIP0 AC138932.5-201ENST00000617759 563 ntBASIC3.84□□□□□ -1.8
RIF1Q5UIP0 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC3.84□□□□□ -1.8
RIF1Q5UIP0 AL590240.3-201ENST00000621416 943 ntBASIC3.84□□□□□ -1.8
RIF1Q5UIP0 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
RIF1Q5UIP0 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
RIF1Q5UIP0 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
RIF1Q5UIP0 AL161912.2-201ENST00000565707 3007 ntBASIC3.84□□□□□ -1.8
RIF1Q5UIP0 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
RIF1Q5UIP0 AC006971.1-201ENST00000407916 4486 ntBASIC3.84□□□□□ -1.8
RIF1Q5UIP0 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
RIF1Q5UIP0 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC3.83□□□□□ -1.8
RIF1Q5UIP0 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RIF1Q5UIP0 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RIF1Q5UIP0 CAST-202ENST00000325674 3356 ntTSL 5 BASIC3.83□□□□□ -1.8
RIF1Q5UIP0 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RIF1Q5UIP0 KCNMB3P1-202ENST00000493696 3389 ntBASIC3.83□□□□□ -1.8
RIF1Q5UIP0 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.83□□□□□ -1.8
RIF1Q5UIP0 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
RIF1Q5UIP0 RNA5SP151-201ENST00000365632 117 ntBASIC3.83□□□□□ -1.8
RIF1Q5UIP0 RPS29P4-201ENST00000414733 161 ntBASIC3.83□□□□□ -1.8
RIF1Q5UIP0 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RIF1Q5UIP0 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.83□□□□□ -1.8
RIF1Q5UIP0 TCEA1P2-201ENST00000420496 906 ntBASIC3.83□□□□□ -1.8
RIF1Q5UIP0 DPY19L1P2-201ENST00000426647 915 ntBASIC3.83□□□□□ -1.8
RIF1Q5UIP0 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.83□□□□□ -1.8
RIF1Q5UIP0 AL133162.1-201ENST00000463228 453 ntBASIC3.83□□□□□ -1.8
RIF1Q5UIP0 RPL7P1-201ENST00000468161 747 ntBASIC3.83□□□□□ -1.8
RIF1Q5UIP0 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RIF1Q5UIP0 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RIF1Q5UIP0 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
RIF1Q5UIP0 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC3.83□□□□□ -1.8
RIF1Q5UIP0 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.83□□□□□ -1.8
RIF1Q5UIP0 AC006023.1-201ENST00000603944 259 ntBASIC3.83□□□□□ -1.8
RIF1Q5UIP0 AL137849.1-201ENST00000604767 169 ntBASIC3.83□□□□□ -1.8
RIF1Q5UIP0 MIR7106-201ENST00000612419 65 ntBASIC3.83□□□□□ -1.8
RIF1Q5UIP0 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.83□□□□□ -1.8
RIF1Q5UIP0 CDY3P-201ENST00000454543 1618 ntBASIC3.83□□□□□ -1.8
RIF1Q5UIP0 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
RIF1Q5UIP0 SRP72P2-201ENST00000344851 1979 ntBASIC3.83□□□□□ -1.8
RIF1Q5UIP0 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RIF1Q5UIP0 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
RIF1Q5UIP0 FAP-203ENST00000443424 2598 ntTSL 2 BASIC3.83□□□□□ -1.8
RIF1Q5UIP0 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RIF1Q5UIP0 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RIF1Q5UIP0 SNORA3C-201ENST00000408792 125 ntBASIC3.83□□□□□ -1.8
RIF1Q5UIP0 AC073063.1-201ENST00000434352 607 ntBASIC3.83□□□□□ -1.8
RIF1Q5UIP0 AGGF1P3-201ENST00000493675 1213 ntBASIC3.83□□□□□ -1.8
RIF1Q5UIP0 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.83□□□□□ -1.8
RIF1Q5UIP0 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.83□□□□□ -1.8
RIF1Q5UIP0 MYL12BP2-201ENST00000503948 512 ntBASIC3.83□□□□□ -1.8
RIF1Q5UIP0 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC3.83□□□□□ -1.8
RIF1Q5UIP0 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.83□□□□□ -1.8
RIF1Q5UIP0 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.83□□□□□ -1.8
RIF1Q5UIP0 AC069240.1-201ENST00000548774 375 ntBASIC3.83□□□□□ -1.8
RIF1Q5UIP0 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms