Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.2□□□□□ -1.74
PDLIM3Q53GG5 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.2□□□□□ -1.74
PDLIM3Q53GG5 CCNB1IP1P3-201ENST00000454702 829 ntBASIC4.2□□□□□ -1.74
PDLIM3Q53GG5 RPL7P32-201ENST00000457119 744 ntBASIC4.2□□□□□ -1.74
PDLIM3Q53GG5 AC034236.1-201ENST00000469891 373 ntBASIC4.2□□□□□ -1.74
PDLIM3Q53GG5 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
PDLIM3Q53GG5 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.2□□□□□ -1.74
PDLIM3Q53GG5 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.2□□□□□ -1.74
PDLIM3Q53GG5 AC023050.1-201ENST00000498198 304 ntBASIC4.2□□□□□ -1.74
PDLIM3Q53GG5 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.2□□□□□ -1.74
PDLIM3Q53GG5 AC093752.1-206ENST00000511823 336 ntBASIC4.2□□□□□ -1.74
PDLIM3Q53GG5 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.2□□□□□ -1.74
PDLIM3Q53GG5 IGKV2-23-201ENST00000518729 323 ntBASIC4.2□□□□□ -1.74
PDLIM3Q53GG5 AC022790.1-201ENST00000522872 204 ntBASIC4.2□□□□□ -1.74
PDLIM3Q53GG5 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.2□□□□□ -1.74
PDLIM3Q53GG5 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.2□□□□□ -1.74
PDLIM3Q53GG5 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.2□□□□□ -1.74
PDLIM3Q53GG5 AC027104.1-201ENST00000563702 681 ntBASIC4.2□□□□□ -1.74
PDLIM3Q53GG5 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.2□□□□□ -1.74
PDLIM3Q53GG5 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.2□□□□□ -1.74
PDLIM3Q53GG5 AC011477.5-201ENST00000586571 259 ntBASIC4.2□□□□□ -1.74
PDLIM3Q53GG5 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.2□□□□□ -1.74
PDLIM3Q53GG5 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.2□□□□□ -1.74
PDLIM3Q53GG5 AC011487.3-201ENST00000593607 453 ntBASIC4.2□□□□□ -1.74
PDLIM3Q53GG5 AC125494.3-201ENST00000602759 455 ntBASIC4.2□□□□□ -1.74
PDLIM3Q53GG5 BNIP3P11-201ENST00000603878 563 ntBASIC4.2□□□□□ -1.74
PDLIM3Q53GG5 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.2□□□□□ -1.74
PDLIM3Q53GG5 OR2BH1P-201ENST00000608850 864 ntBASIC4.2□□□□□ -1.74
PDLIM3Q53GG5 EIF3FP1-201ENST00000613970 806 ntBASIC4.2□□□□□ -1.74
PDLIM3Q53GG5 AC015914.2-201ENST00000618167 288 ntBASIC4.2□□□□□ -1.74
PDLIM3Q53GG5 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
PDLIM3Q53GG5 MIR6715B-201ENST00000637172 77 ntBASIC4.2□□□□□ -1.74
PDLIM3Q53GG5 OR2L1P-202ENST00000641567 1023 ntBASIC4.2□□□□□ -1.74
PDLIM3Q53GG5 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.2□□□□□ -1.74
PDLIM3Q53GG5 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PDLIM3Q53GG5 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC4.2□□□□□ -1.74
PDLIM3Q53GG5 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
PDLIM3Q53GG5 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.2□□□□□ -1.74
PDLIM3Q53GG5 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PDLIM3Q53GG5 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 RNA5SP339-201ENST00000390987 122 ntBASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 RPL23AP59-201ENST00000399415 461 ntBASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 AL450992.3-201ENST00000413192 568 ntBASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 BTF3P8-201ENST00000414577 526 ntBASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 GAPDHP49-201ENST00000421421 961 ntBASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 USP12PY-201ENST00000427677 1064 ntBASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 AC008072.1-201ENST00000434254 824 ntBASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 HMGB1P45-201ENST00000435986 653 ntBASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 Z80107.1-201ENST00000436830 412 ntBASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 MTCO1P53-201ENST00000441633 699 ntBASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 RPL7AP61-201ENST00000443410 636 ntBASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 DNAJC19P8-201ENST00000452887 259 ntBASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 AC011037.1-201ENST00000483964 558 ntBASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 IGLV2-34-201ENST00000490007 283 ntBASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 AC005412.2-201ENST00000492004 341 ntBASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 AC097173.1-201ENST00000505862 819 ntBASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 AC113430.1-201ENST00000506872 718 ntBASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 AC026402.1-201ENST00000513642 170 ntBASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 RNA5SP360-201ENST00000516555 118 ntBASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 RPL23AP53-201ENST00000521854 457 ntBASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 AP005119.2-201ENST00000579735 1105 ntBASIC4.19□□□□□ -1.74
PDLIM3Q53GG5 VN1R87P-201ENST00000596706 487 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms