Protein–RNA interactions for Protein: Q17RB0

RTL8B, Retrotransposon Gag-like protein 8B, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8BQ17RB0 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
RTL8BQ17RB0 AC099522.1-202ENST00000514718 367 ntBASIC3.32□□□□□ -1.88
RTL8BQ17RB0 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.32□□□□□ -1.88
RTL8BQ17RB0 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.32□□□□□ -1.88
RTL8BQ17RB0 TRAV8-5-201ENST00000537369 341 ntBASIC3.32□□□□□ -1.88
RTL8BQ17RB0 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.32□□□□□ -1.88
RTL8BQ17RB0 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.32□□□□□ -1.88
RTL8BQ17RB0 AC084757.1-201ENST00000559987 490 ntBASIC3.32□□□□□ -1.88
RTL8BQ17RB0 AC079171.1-201ENST00000568788 914 ntBASIC3.32□□□□□ -1.88
RTL8BQ17RB0 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC3.32□□□□□ -1.88
RTL8BQ17RB0 AC025627.2-201ENST00000576220 160 ntBASIC3.32□□□□□ -1.88
RTL8BQ17RB0 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.32□□□□□ -1.88
RTL8BQ17RB0 FAM106CP-201ENST00000582212 507 ntBASIC3.32□□□□□ -1.88
RTL8BQ17RB0 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RTL8BQ17RB0 AL161729.3-201ENST00000603533 673 ntBASIC3.32□□□□□ -1.88
RTL8BQ17RB0 OR6R2P-201ENST00000609216 300 ntBASIC3.32□□□□□ -1.88
RTL8BQ17RB0 MIR486-1-201ENST00000612171 68 ntBASIC3.32□□□□□ -1.88
RTL8BQ17RB0 AL773545.4-201ENST00000637262 310 ntBASIC3.32□□□□□ -1.88
RTL8BQ17RB0 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.32□□□□□ -1.88
RTL8BQ17RB0 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.32□□□□□ -1.88
RTL8BQ17RB0 AL513478.4-201ENST00000641636 310 ntBASIC3.32□□□□□ -1.88
RTL8BQ17RB0 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.32□□□□□ -1.88
RTL8BQ17RB0 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
RTL8BQ17RB0 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RTL8BQ17RB0 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
RTL8BQ17RB0 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
RTL8BQ17RB0 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RTL8BQ17RB0 USP9YP4-201ENST00000424401 1745 ntBASIC3.32□□□□□ -1.88
RTL8BQ17RB0 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.32□□□□□ -1.88
RTL8BQ17RB0 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RTL8BQ17RB0 AC009951.1-201ENST00000623674 2614 ntBASIC3.32□□□□□ -1.88
RTL8BQ17RB0 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.32□□□□□ -1.88
RTL8BQ17RB0 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.31□□□□□ -1.88
RTL8BQ17RB0 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
RTL8BQ17RB0 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RTL8BQ17RB0 AC139713.2-214ENST00000642059 1811 ntBASIC3.31□□□□□ -1.88
RTL8BQ17RB0 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RTL8BQ17RB0 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
RTL8BQ17RB0 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RTL8BQ17RB0 AC027287.1-201ENST00000553115 1453 ntBASIC3.31□□□□□ -1.88
RTL8BQ17RB0 AC103591.2-201ENST00000265259 766 ntBASIC3.31□□□□□ -1.88
RTL8BQ17RB0 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
RTL8BQ17RB0 RNU1-132P-201ENST00000364300 164 ntBASIC3.31□□□□□ -1.88
RTL8BQ17RB0 RNA5SP366-201ENST00000365454 123 ntBASIC3.31□□□□□ -1.88
RTL8BQ17RB0 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
RTL8BQ17RB0 METTL5-204ENST00000409340 472 ntTSL 5 BASIC3.31□□□□□ -1.88
RTL8BQ17RB0 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.31□□□□□ -1.88
RTL8BQ17RB0 AC068287.1-201ENST00000430283 295 ntBASIC3.31□□□□□ -1.88
RTL8BQ17RB0 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.31□□□□□ -1.88
RTL8BQ17RB0 AF228730.2-201ENST00000438784 848 ntBASIC3.31□□□□□ -1.88
RTL8BQ17RB0 AC006011.1-201ENST00000442758 349 ntBASIC3.31□□□□□ -1.88
RTL8BQ17RB0 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.31□□□□□ -1.88
RTL8BQ17RB0 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC3.31□□□□□ -1.88
RTL8BQ17RB0 AC092691.2-201ENST00000461787 803 ntBASIC3.31□□□□□ -1.88
RTL8BQ17RB0 RN7SL604P-201ENST00000492589 296 ntBASIC3.31□□□□□ -1.88
RTL8BQ17RB0 AC108475.1-201ENST00000507880 950 ntBASIC3.31□□□□□ -1.88
RTL8BQ17RB0 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.31□□□□□ -1.88
RTL8BQ17RB0 AC005798.1-201ENST00000513715 387 ntBASIC3.31□□□□□ -1.88
RTL8BQ17RB0 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.31□□□□□ -1.88
RTL8BQ17RB0 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.31□□□□□ -1.88
RTL8BQ17RB0 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC3.31□□□□□ -1.88
RTL8BQ17RB0 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.31□□□□□ -1.88
RTL8BQ17RB0 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC3.31□□□□□ -1.88
RTL8BQ17RB0 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.31□□□□□ -1.88
RTL8BQ17RB0 MIR5684-201ENST00000585074 65 ntBASIC3.31□□□□□ -1.88
RTL8BQ17RB0 AC068020.1-201ENST00000594215 661 ntBASIC3.31□□□□□ -1.88
RTL8BQ17RB0 MRPS35P3-201ENST00000603189 709 ntBASIC3.31□□□□□ -1.88
RTL8BQ17RB0 AC010200.2-201ENST00000605098 235 ntBASIC3.31□□□□□ -1.88
RTL8BQ17RB0 AC015849.6-201ENST00000605454 474 ntBASIC3.31□□□□□ -1.88
RTL8BQ17RB0 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.31□□□□□ -1.88
RTL8BQ17RB0 MIR7703-201ENST00000620784 77 ntBASIC3.31□□□□□ -1.88
RTL8BQ17RB0 AP000346.3-201ENST00000622821 210 ntBASIC3.31□□□□□ -1.88
RTL8BQ17RB0 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.31□□□□□ -1.88
RTL8BQ17RB0 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RTL8BQ17RB0 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RTL8BQ17RB0 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.3□□□□□ -1.88
RTL8BQ17RB0 AP001486.2-201ENST00000561652 5113 ntBASIC3.3□□□□□ -1.88
RTL8BQ17RB0 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RTL8BQ17RB0 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RTL8BQ17RB0 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC3.3□□□□□ -1.88
RTL8BQ17RB0 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RTL8BQ17RB0 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.3□□□□□ -1.88
RTL8BQ17RB0 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.3□□□□□ -1.88
RTL8BQ17RB0 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
RTL8BQ17RB0 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC3.3□□□□□ -1.88
RTL8BQ17RB0 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RTL8BQ17RB0 SNORA37-201ENST00000384504 129 ntBASIC3.3□□□□□ -1.88
RTL8BQ17RB0 RPL23AP26-201ENST00000412728 464 ntBASIC3.3□□□□□ -1.88
RTL8BQ17RB0 AL590806.1-201ENST00000415818 853 ntBASIC3.3□□□□□ -1.88
RTL8BQ17RB0 AC023141.6-201ENST00000429418 337 ntBASIC3.3□□□□□ -1.88
RTL8BQ17RB0 VDAC1P6-201ENST00000430062 855 ntBASIC3.3□□□□□ -1.88
RTL8BQ17RB0 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.3□□□□□ -1.88
RTL8BQ17RB0 RN7SL738P-201ENST00000470264 297 ntBASIC3.3□□□□□ -1.88
RTL8BQ17RB0 UQCRHP4-201ENST00000471686 272 ntBASIC3.3□□□□□ -1.88
RTL8BQ17RB0 S100A11P1-201ENST00000477525 312 ntBASIC3.3□□□□□ -1.88
RTL8BQ17RB0 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.3□□□□□ -1.88
RTL8BQ17RB0 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.3□□□□□ -1.88
RTL8BQ17RB0 HPRT1P2-201ENST00000505250 544 ntBASIC3.3□□□□□ -1.88
RTL8BQ17RB0 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.3□□□□□ -1.88
RTL8BQ17RB0 NARSP2-201ENST00000518524 679 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms