Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC3.62□□□□□ -1.83
FOXF1Q12946 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.62□□□□□ -1.83
FOXF1Q12946 AC013268.2-201ENST00000420753 337 ntBASIC3.62□□□□□ -1.83
FOXF1Q12946 AL034379.1-201ENST00000423216 253 ntBASIC3.62□□□□□ -1.83
FOXF1Q12946 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.62□□□□□ -1.83
FOXF1Q12946 AL117339.2-201ENST00000430475 180 ntBASIC3.62□□□□□ -1.83
FOXF1Q12946 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.62□□□□□ -1.83
FOXF1Q12946 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
FOXF1Q12946 AL162151.2-201ENST00000448875 158 ntBASIC3.62□□□□□ -1.83
FOXF1Q12946 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.62□□□□□ -1.83
FOXF1Q12946 NUTF2P7-201ENST00000453086 375 ntBASIC3.62□□□□□ -1.83
FOXF1Q12946 FABP3P2-201ENST00000453169 399 ntBASIC3.62□□□□□ -1.83
FOXF1Q12946 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.62□□□□□ -1.83
FOXF1Q12946 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.62□□□□□ -1.83
FOXF1Q12946 RN7SL271P-201ENST00000487601 295 ntBASIC3.62□□□□□ -1.83
FOXF1Q12946 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.62□□□□□ -1.83
FOXF1Q12946 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.62□□□□□ -1.83
FOXF1Q12946 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.62□□□□□ -1.83
FOXF1Q12946 IGLVIV-53-201ENST00000520107 367 ntBASIC3.62□□□□□ -1.83
FOXF1Q12946 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC3.62□□□□□ -1.83
FOXF1Q12946 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.62□□□□□ -1.83
FOXF1Q12946 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.62□□□□□ -1.83
FOXF1Q12946 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.62□□□□□ -1.83
FOXF1Q12946 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.62□□□□□ -1.83
FOXF1Q12946 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.62□□□□□ -1.83
FOXF1Q12946 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC3.62□□□□□ -1.83
FOXF1Q12946 AP000255.1-201ENST00000610276 676 ntBASIC3.62□□□□□ -1.83
FOXF1Q12946 AC124312.6-202ENST00000623624 418 ntBASIC3.62□□□□□ -1.83
FOXF1Q12946 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.62□□□□□ -1.83
FOXF1Q12946 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
FOXF1Q12946 AC245100.2-201ENST00000454544 1679 ntBASIC3.62□□□□□ -1.83
FOXF1Q12946 CR382285.2-201ENST00000624662 1495 ntBASIC3.61□□□□□ -1.83
FOXF1Q12946 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
FOXF1Q12946 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
FOXF1Q12946 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
FOXF1Q12946 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
FOXF1Q12946 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
FOXF1Q12946 RNA5SP399-201ENST00000364003 117 ntBASIC3.61□□□□□ -1.83
FOXF1Q12946 RPL23AP48-201ENST00000406913 488 ntBASIC3.61□□□□□ -1.83
FOXF1Q12946 SNORA3C-201ENST00000408792 125 ntBASIC3.61□□□□□ -1.83
FOXF1Q12946 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC3.61□□□□□ -1.83
FOXF1Q12946 AL391219.1-201ENST00000422570 483 ntBASIC3.61□□□□□ -1.83
FOXF1Q12946 HIGD1AP4-201ENST00000430194 280 ntBASIC3.61□□□□□ -1.83
FOXF1Q12946 MTND6P18-201ENST00000439477 513 ntBASIC3.61□□□□□ -1.83
FOXF1Q12946 HSFY6P-201ENST00000445573 403 ntBASIC3.61□□□□□ -1.83
FOXF1Q12946 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.61□□□□□ -1.83
FOXF1Q12946 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
FOXF1Q12946 HMGB3P22-202ENST00000451823 572 ntBASIC3.61□□□□□ -1.83
FOXF1Q12946 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC3.61□□□□□ -1.83
FOXF1Q12946 RPL5P32-201ENST00000454085 879 ntBASIC3.61□□□□□ -1.83
FOXF1Q12946 AL133477.1-201ENST00000457472 514 ntBASIC3.61□□□□□ -1.83
FOXF1Q12946 AC103987.1-201ENST00000473394 348 ntBASIC3.61□□□□□ -1.83
FOXF1Q12946 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.61□□□□□ -1.83
FOXF1Q12946 RPL31P61-201ENST00000496160 376 ntBASIC3.61□□□□□ -1.83
FOXF1Q12946 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC3.61□□□□□ -1.83
FOXF1Q12946 FTH1P21-201ENST00000512179 511 ntBASIC3.61□□□□□ -1.83
FOXF1Q12946 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC3.61□□□□□ -1.83
FOXF1Q12946 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.61□□□□□ -1.83
FOXF1Q12946 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.61□□□□□ -1.83
FOXF1Q12946 PDCD5P1-201ENST00000543528 309 ntBASIC3.61□□□□□ -1.83
FOXF1Q12946 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.61□□□□□ -1.83
FOXF1Q12946 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.61□□□□□ -1.83
FOXF1Q12946 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.61□□□□□ -1.83
FOXF1Q12946 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.61□□□□□ -1.83
FOXF1Q12946 AC092653.1-201ENST00000608509 531 ntBASIC3.61□□□□□ -1.83
FOXF1Q12946 AC128687.2-201ENST00000609657 566 ntBASIC3.61□□□□□ -1.83
FOXF1Q12946 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC3.61□□□□□ -1.83
FOXF1Q12946 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.61□□□□□ -1.83
FOXF1Q12946 AL591424.2-201ENST00000617023 128 ntBASIC3.61□□□□□ -1.83
FOXF1Q12946 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.61□□□□□ -1.83
FOXF1Q12946 MIR6500-201ENST00000622700 86 ntBASIC3.61□□□□□ -1.83
FOXF1Q12946 AL359715.5-201ENST00000623431 443 ntBASIC3.61□□□□□ -1.83
FOXF1Q12946 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.61□□□□□ -1.83
FOXF1Q12946 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.61□□□□□ -1.83
FOXF1Q12946 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC3.61□□□□□ -1.83
FOXF1Q12946 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC3.61□□□□□ -1.83
FOXF1Q12946 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
FOXF1Q12946 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
FOXF1Q12946 AL031985.3-201ENST00000565390 2449 ntBASIC3.61□□□□□ -1.83
FOXF1Q12946 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
FOXF1Q12946 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
FOXF1Q12946 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
FOXF1Q12946 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
FOXF1Q12946 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
FOXF1Q12946 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.6□□□□□ -1.83
FOXF1Q12946 RPL7AP73-201ENST00000413490 353 ntBASIC3.6□□□□□ -1.83
FOXF1Q12946 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.6□□□□□ -1.83
FOXF1Q12946 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.6□□□□□ -1.83
FOXF1Q12946 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.6□□□□□ -1.83
FOXF1Q12946 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.6□□□□□ -1.83
FOXF1Q12946 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.6□□□□□ -1.83
FOXF1Q12946 RPSAP41-201ENST00000439695 860 ntBASIC3.6□□□□□ -1.83
FOXF1Q12946 MTND6P5-201ENST00000448266 512 ntBASIC3.6□□□□□ -1.83
FOXF1Q12946 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.6□□□□□ -1.83
FOXF1Q12946 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
FOXF1Q12946 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.6□□□□□ -1.83
FOXF1Q12946 RNA5SP179-201ENST00000517284 121 ntBASIC3.6□□□□□ -1.83
FOXF1Q12946 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.6□□□□□ -1.83
FOXF1Q12946 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.6□□□□□ -1.83
FOXF1Q12946 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms