Protein–RNA interactions for Protein: Q05682

CALD1, Caldesmon, humanhuman

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1Q05682 RNU6-883P-201ENST00000384597 107 ntBASIC5.6□□□□□ -1.51
CALD1Q05682 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.6□□□□□ -1.51
CALD1Q05682 PDSS1P1-201ENST00000422953 1114 ntBASIC5.6□□□□□ -1.51
CALD1Q05682 AC073335.1-201ENST00000427776 363 ntBASIC5.6□□□□□ -1.51
CALD1Q05682 MTND4LP7-201ENST00000431728 294 ntBASIC5.6□□□□□ -1.51
CALD1Q05682 MTND2P21-201ENST00000436242 1042 ntBASIC5.6□□□□□ -1.51
CALD1Q05682 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC5.6□□□□□ -1.51
CALD1Q05682 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CALD1Q05682 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.6□□□□□ -1.51
CALD1Q05682 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC5.6□□□□□ -1.51
CALD1Q05682 RPS23P7-201ENST00000466210 444 ntBASIC5.6□□□□□ -1.51
CALD1Q05682 MTCO1P31-201ENST00000506355 492 ntBASIC5.6□□□□□ -1.51
CALD1Q05682 PGBD4P4-201ENST00000509673 613 ntBASIC5.6□□□□□ -1.51
CALD1Q05682 PARP4P3-201ENST00000510265 317 ntBASIC5.6□□□□□ -1.51
CALD1Q05682 AC008958.1-201ENST00000511047 682 ntBASIC5.6□□□□□ -1.51
CALD1Q05682 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.6□□□□□ -1.51
CALD1Q05682 RNA5SP154-201ENST00000516193 111 ntBASIC5.6□□□□□ -1.51
CALD1Q05682 AC008694.2-201ENST00000517591 306 ntBASIC5.6□□□□□ -1.51
CALD1Q05682 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.6□□□□□ -1.51
CALD1Q05682 HMGB1P46-201ENST00000520062 610 ntBASIC5.6□□□□□ -1.51
CALD1Q05682 IGLVIV-53-201ENST00000520107 367 ntBASIC5.6□□□□□ -1.51
CALD1Q05682 IPO5P1-202ENST00000600039 287 ntBASIC5.6□□□□□ -1.51
CALD1Q05682 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CALD1Q05682 AC023813.4-201ENST00000607580 580 ntBASIC5.6□□□□□ -1.51
CALD1Q05682 AC135803.1-201ENST00000608748 565 ntBASIC5.6□□□□□ -1.51
CALD1Q05682 MIR378J-201ENST00000611988 109 ntBASIC5.6□□□□□ -1.51
CALD1Q05682 AP000843.1-201ENST00000624880 701 ntBASIC5.6□□□□□ -1.51
CALD1Q05682 MIR3653-201ENST00000625572 110 ntBASIC5.6□□□□□ -1.51
CALD1Q05682 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CALD1Q05682 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.6□□□□□ -1.51
CALD1Q05682 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CALD1Q05682 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
CALD1Q05682 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CALD1Q05682 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.6□□□□□ -1.51
CALD1Q05682 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC5.6□□□□□ -1.51
CALD1Q05682 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.59□□□□□ -1.51
CALD1Q05682 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CALD1Q05682 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CALD1Q05682 AC017002.4-201ENST00000604721 1525 ntBASIC5.59□□□□□ -1.51
CALD1Q05682 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CALD1Q05682 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CALD1Q05682 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC5.59□□□□□ -1.51
CALD1Q05682 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CALD1Q05682 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CALD1Q05682 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CALD1Q05682 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.59□□□□□ -1.51
CALD1Q05682 MIR93-201ENST00000385024 80 ntBASIC5.59□□□□□ -1.51
CALD1Q05682 OR6C69P-201ENST00000394268 893 ntBASIC5.59□□□□□ -1.51
CALD1Q05682 RPL23AP26-201ENST00000412728 464 ntBASIC5.59□□□□□ -1.51
CALD1Q05682 RPL6P29-201ENST00000414863 865 ntBASIC5.59□□□□□ -1.51
CALD1Q05682 AC004552.1-201ENST00000419089 348 ntBASIC5.59□□□□□ -1.51
CALD1Q05682 MFSD13B-201ENST00000420133 1290 ntBASIC5.59□□□□□ -1.51
CALD1Q05682 SKP1P3-201ENST00000429280 487 ntBASIC5.59□□□□□ -1.51
CALD1Q05682 MTND4LP14-201ENST00000429447 288 ntBASIC5.59□□□□□ -1.51
CALD1Q05682 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.59□□□□□ -1.51
CALD1Q05682 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.59□□□□□ -1.51
CALD1Q05682 CASP3P1-201ENST00000446037 609 ntBASIC5.59□□□□□ -1.51
CALD1Q05682 AC022431.1-201ENST00000450941 438 ntBASIC5.59□□□□□ -1.51
CALD1Q05682 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC5.59□□□□□ -1.51
CALD1Q05682 AC089999.1-201ENST00000460336 374 ntBASIC5.59□□□□□ -1.51
CALD1Q05682 RPS26P3-201ENST00000470205 348 ntBASIC5.59□□□□□ -1.51
CALD1Q05682 AC109327.1-201ENST00000471666 403 ntBASIC5.59□□□□□ -1.51
CALD1Q05682 UQCRHP4-201ENST00000471686 272 ntBASIC5.59□□□□□ -1.51
CALD1Q05682 AC090543.2-201ENST00000483963 348 ntBASIC5.59□□□□□ -1.51
CALD1Q05682 AC004057.1-201ENST00000485827 348 ntBASIC5.59□□□□□ -1.51
CALD1Q05682 AC091167.1-201ENST00000492017 396 ntBASIC5.59□□□□□ -1.51
CALD1Q05682 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC5.59□□□□□ -1.51
CALD1Q05682 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.59□□□□□ -1.51
CALD1Q05682 HPRT1P1-201ENST00000509498 657 ntBASIC5.59□□□□□ -1.51
CALD1Q05682 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.59□□□□□ -1.51
CALD1Q05682 RNA5SP49-201ENST00000516450 115 ntBASIC5.59□□□□□ -1.51
CALD1Q05682 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.59□□□□□ -1.51
CALD1Q05682 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.59□□□□□ -1.51
CALD1Q05682 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.59□□□□□ -1.51
CALD1Q05682 AC069240.1-201ENST00000548774 375 ntBASIC5.59□□□□□ -1.51
CALD1Q05682 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC5.59□□□□□ -1.51
CALD1Q05682 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.59□□□□□ -1.51
CALD1Q05682 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.59□□□□□ -1.51
CALD1Q05682 AL445423.1-201ENST00000609941 536 ntBASIC5.59□□□□□ -1.51
CALD1Q05682 CR589904.2-201ENST00000612533 440 ntBASIC5.59□□□□□ -1.51
CALD1Q05682 AC145207.9-201ENST00000623802 325 ntBASIC5.59□□□□□ -1.51
CALD1Q05682 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CALD1Q05682 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.59□□□□□ -1.51
CALD1Q05682 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC5.59□□□□□ -1.51
CALD1Q05682 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC5.59□□□□□ -1.51
CALD1Q05682 CCT8P1-201ENST00000413611 1657 ntBASIC5.59□□□□□ -1.52
CALD1Q05682 AC087190.4-201ENST00000574616 8334 ntBASIC5.59□□□□□ -1.52
CALD1Q05682 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CALD1Q05682 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CALD1Q05682 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CALD1Q05682 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
CALD1Q05682 RNU6-244P-201ENST00000391028 104 ntBASIC5.58□□□□□ -1.52
CALD1Q05682 SNORD66.1-201ENST00000391230 76 ntBASIC5.58□□□□□ -1.52
CALD1Q05682 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CALD1Q05682 MIR1179-201ENST00000408703 91 ntBASIC5.58□□□□□ -1.52
CALD1Q05682 RN7SKP222-201ENST00000410651 315 ntBASIC5.58□□□□□ -1.52
CALD1Q05682 RN7SKP235-201ENST00000410662 305 ntBASIC5.58□□□□□ -1.52
CALD1Q05682 RNA5SP104-201ENST00000410989 118 ntBASIC5.58□□□□□ -1.52
CALD1Q05682 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.58□□□□□ -1.52
CALD1Q05682 RANP4-201ENST00000413361 655 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms