Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CBX1P83916 AC017002.4-201ENST00000604721 1525 ntBASIC4.36□□□□□ -1.71
CBX1P83916 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CBX1P83916 MFSD8-236ENST00000641509 4050 ntBASIC4.36□□□□□ -1.71
CBX1P83916 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.36□□□□□ -1.71
CBX1P83916 XIAPP3-201ENST00000312918 795 ntBASIC4.36□□□□□ -1.71
CBX1P83916 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CBX1P83916 RNU6-1279P-201ENST00000383917 103 ntBASIC4.36□□□□□ -1.71
CBX1P83916 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.36□□□□□ -1.71
CBX1P83916 NPM1P4-201ENST00000414095 812 ntBASIC4.36□□□□□ -1.71
CBX1P83916 AC009965.2-201ENST00000425328 970 ntBASIC4.36□□□□□ -1.71
CBX1P83916 CEACAMP1-201ENST00000434624 1035 ntBASIC4.36□□□□□ -1.71
CBX1P83916 RHOT1P3-201ENST00000436571 331 ntBASIC4.36□□□□□ -1.71
CBX1P83916 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.36□□□□□ -1.71
CBX1P83916 HMGB3P8-201ENST00000449709 577 ntBASIC4.36□□□□□ -1.71
CBX1P83916 AL645939.1-201ENST00000453429 797 ntBASIC4.36□□□□□ -1.71
CBX1P83916 MTCO3P20-201ENST00000454926 688 ntBASIC4.36□□□□□ -1.71
CBX1P83916 RN7SL329P-201ENST00000467740 299 ntBASIC4.36□□□□□ -1.71
CBX1P83916 RPS4XP1-201ENST00000482189 787 ntBASIC4.36□□□□□ -1.71
CBX1P83916 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.36□□□□□ -1.71
CBX1P83916 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC4.36□□□□□ -1.71
CBX1P83916 AC026726.1-201ENST00000512859 601 ntBASIC4.36□□□□□ -1.71
CBX1P83916 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.36□□□□□ -1.71
CBX1P83916 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.36□□□□□ -1.71
CBX1P83916 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.36□□□□□ -1.71
CBX1P83916 AC067805.1-201ENST00000559344 470 ntBASIC4.36□□□□□ -1.71
CBX1P83916 AC007225.2-201ENST00000562529 256 ntBASIC4.36□□□□□ -1.71
CBX1P83916 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.36□□□□□ -1.71
CBX1P83916 MIR4330-201ENST00000579077 105 ntBASIC4.36□□□□□ -1.71
CBX1P83916 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.36□□□□□ -1.71
CBX1P83916 AP000864.1-201ENST00000609424 650 ntBASIC4.36□□□□□ -1.71
CBX1P83916 AC006946.3-201ENST00000609791 756 ntBASIC4.36□□□□□ -1.71
CBX1P83916 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC4.36□□□□□ -1.71
CBX1P83916 AC092628.2-201ENST00000622492 339 ntBASIC4.36□□□□□ -1.71
CBX1P83916 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.36□□□□□ -1.71
CBX1P83916 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CBX1P83916 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CBX1P83916 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CBX1P83916 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
CBX1P83916 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.35□□□□□ -1.71
CBX1P83916 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CBX1P83916 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CBX1P83916 SNORA27.3-201ENST00000364937 134 ntBASIC4.35□□□□□ -1.71
CBX1P83916 RNA5SP455-201ENST00000365190 119 ntBASIC4.35□□□□□ -1.71
CBX1P83916 AC083799.1-201ENST00000366451 910 ntBASIC4.35□□□□□ -1.71
CBX1P83916 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CBX1P83916 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CBX1P83916 AL590704.1-201ENST00000402856 794 ntBASIC4.35□□□□□ -1.71
CBX1P83916 AL589655.1-201ENST00000405398 482 ntBASIC4.35□□□□□ -1.71
CBX1P83916 AC013404.1-201ENST00000413068 249 ntBASIC4.35□□□□□ -1.71
CBX1P83916 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.35□□□□□ -1.71
CBX1P83916 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.35□□□□□ -1.71
CBX1P83916 AC002075.2-201ENST00000425207 252 ntBASIC4.35□□□□□ -1.71
CBX1P83916 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.35□□□□□ -1.71
CBX1P83916 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
CBX1P83916 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.35□□□□□ -1.71
CBX1P83916 AL500522.2-201ENST00000448562 343 ntBASIC4.35□□□□□ -1.71
CBX1P83916 HMGB1P26-201ENST00000452520 628 ntBASIC4.35□□□□□ -1.71
CBX1P83916 IFNWP4-201ENST00000453148 294 ntBASIC4.35□□□□□ -1.71
CBX1P83916 AC092691.2-201ENST00000461787 803 ntBASIC4.35□□□□□ -1.71
CBX1P83916 RPS27AP17-201ENST00000463344 455 ntBASIC4.35□□□□□ -1.71
CBX1P83916 AC004069.2-201ENST00000505438 1114 ntBASIC4.35□□□□□ -1.71
CBX1P83916 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.35□□□□□ -1.71
CBX1P83916 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CBX1P83916 OR5M2P-201ENST00000529003 936 ntBASIC4.35□□□□□ -1.71
CBX1P83916 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.35□□□□□ -1.71
CBX1P83916 GNRHR2P1-201ENST00000555315 631 ntBASIC4.35□□□□□ -1.71
CBX1P83916 AL049870.4-201ENST00000555741 486 ntBASIC4.35□□□□□ -1.71
CBX1P83916 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.35□□□□□ -1.71
CBX1P83916 AL133457.1-201ENST00000564251 987 ntBASIC4.35□□□□□ -1.71
CBX1P83916 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.35□□□□□ -1.71
CBX1P83916 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC4.35□□□□□ -1.71
CBX1P83916 EIF1P6-201ENST00000600054 334 ntBASIC4.35□□□□□ -1.71
CBX1P83916 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.35□□□□□ -1.71
CBX1P83916 AC007423.1-201ENST00000605009 627 ntBASIC4.35□□□□□ -1.71
CBX1P83916 AC090525.3-201ENST00000605601 189 ntBASIC4.35□□□□□ -1.71
CBX1P83916 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.35□□□□□ -1.71
CBX1P83916 AC009318.3-201ENST00000616916 503 ntBASIC4.35□□□□□ -1.71
CBX1P83916 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC4.35□□□□□ -1.71
CBX1P83916 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.35□□□□□ -1.71
CBX1P83916 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.35□□□□□ -1.71
CBX1P83916 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CBX1P83916 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
CBX1P83916 MTCO1P11-201ENST00000429111 1528 ntBASIC4.35□□□□□ -1.71
CBX1P83916 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CBX1P83916 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CBX1P83916 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CBX1P83916 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.34□□□□□ -1.71
CBX1P83916 SNURFL-201ENST00000309296 343 ntBASIC4.34□□□□□ -1.71
CBX1P83916 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CBX1P83916 RNU6-185P-201ENST00000384421 107 ntBASIC4.34□□□□□ -1.71
CBX1P83916 OR1F12-201ENST00000402365 945 ntBASIC4.34□□□□□ -1.71
CBX1P83916 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.34□□□□□ -1.71
CBX1P83916 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CBX1P83916 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.34□□□□□ -1.71
CBX1P83916 AC114755.2-201ENST00000413520 361 ntBASIC4.34□□□□□ -1.71
CBX1P83916 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.34□□□□□ -1.71
CBX1P83916 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.34□□□□□ -1.71
CBX1P83916 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CBX1P83916 AC073069.1-201ENST00000428657 441 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms