Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 RNU7-143P-201ENST00000516781 65 ntBASIC4.49□□□□□ -1.69
CASP4P49662 MRPL49P2-201ENST00000521066 465 ntBASIC4.49□□□□□ -1.69
CASP4P49662 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.49□□□□□ -1.69
CASP4P49662 OR4V1P-201ENST00000525394 1140 ntBASIC4.49□□□□□ -1.69
CASP4P49662 OR5M7P-201ENST00000526140 972 ntBASIC4.49□□□□□ -1.69
CASP4P49662 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.49□□□□□ -1.69
CASP4P49662 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.49□□□□□ -1.69
CASP4P49662 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.49□□□□□ -1.69
CASP4P49662 AC079171.1-201ENST00000568788 914 ntBASIC4.49□□□□□ -1.69
CASP4P49662 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.49□□□□□ -1.69
CASP4P49662 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.49□□□□□ -1.69
CASP4P49662 MIR8059-201ENST00000620427 81 ntBASIC4.49□□□□□ -1.69
CASP4P49662 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.49□□□□□ -1.69
CASP4P49662 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CASP4P49662 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CASP4P49662 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
CASP4P49662 CASC19-284ENST00000642142 1868 ntBASIC4.49□□□□□ -1.69
CASP4P49662 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
CASP4P49662 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.48□□□□□ -1.69
CASP4P49662 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CASP4P49662 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CASP4P49662 RNU11-4P-201ENST00000391149 133 ntBASIC4.48□□□□□ -1.69
CASP4P49662 AL034374.1-201ENST00000406329 351 ntBASIC4.48□□□□□ -1.69
CASP4P49662 RN7SKP33-201ENST00000410942 340 ntBASIC4.48□□□□□ -1.69
CASP4P49662 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.48□□□□□ -1.69
CASP4P49662 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.48□□□□□ -1.69
CASP4P49662 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.48□□□□□ -1.69
CASP4P49662 CASP3P1-201ENST00000446037 609 ntBASIC4.48□□□□□ -1.69
CASP4P49662 AC073587.1-201ENST00000447093 876 ntBASIC4.48□□□□□ -1.69
CASP4P49662 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.48□□□□□ -1.69
CASP4P49662 EIF2S2P4-201ENST00000461070 984 ntBASIC4.48□□□□□ -1.69
CASP4P49662 RPS23P7-201ENST00000466210 444 ntBASIC4.48□□□□□ -1.69
CASP4P49662 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.48□□□□□ -1.69
CASP4P49662 NDUFB4P12-201ENST00000513465 390 ntBASIC4.48□□□□□ -1.69
CASP4P49662 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CASP4P49662 AC138701.1-201ENST00000524329 714 ntBASIC4.48□□□□□ -1.69
CASP4P49662 NPM1P35-201ENST00000533043 868 ntBASIC4.48□□□□□ -1.69
CASP4P49662 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CASP4P49662 AC025884.1-201ENST00000556034 378 ntBASIC4.48□□□□□ -1.69
CASP4P49662 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.48□□□□□ -1.69
CASP4P49662 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.48□□□□□ -1.69
CASP4P49662 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.48□□□□□ -1.69
CASP4P49662 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.48□□□□□ -1.69
CASP4P49662 MIR6810-201ENST00000622701 70 ntBASIC4.48□□□□□ -1.69
CASP4P49662 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.48□□□□□ -1.69
CASP4P49662 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.48□□□□□ -1.69
CASP4P49662 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CASP4P49662 AC007342.9-201ENST00000623877 1385 ntBASIC4.48□□□□□ -1.69
CASP4P49662 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CASP4P49662 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
CASP4P49662 Z82217.1-201ENST00000625157 8149 ntBASIC4.48□□□□□ -1.69
CASP4P49662 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CASP4P49662 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CASP4P49662 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CASP4P49662 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CASP4P49662 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CASP4P49662 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
CASP4P49662 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
CASP4P49662 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.47□□□□□ -1.69
CASP4P49662 MAPK10-253ENST00000641010 4072 ntBASIC4.47□□□□□ -1.69
CASP4P49662 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CASP4P49662 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
CASP4P49662 AL121657.1-201ENST00000327215 531 ntBASIC4.47□□□□□ -1.69
CASP4P49662 RNA5SP443-201ENST00000363083 132 ntBASIC4.47□□□□□ -1.69
CASP4P49662 RNU6-984P-201ENST00000363236 109 ntBASIC4.47□□□□□ -1.69
CASP4P49662 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.47□□□□□ -1.69
CASP4P49662 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CASP4P49662 BTF3P9-201ENST00000418784 283 ntBASIC4.47□□□□□ -1.69
CASP4P49662 IPMKP1-201ENST00000425988 855 ntBASIC4.47□□□□□ -1.69
CASP4P49662 COX6CP15-201ENST00000426313 211 ntBASIC4.47□□□□□ -1.69
CASP4P49662 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.47□□□□□ -1.69
CASP4P49662 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.47□□□□□ -1.69
CASP4P49662 AL356276.2-201ENST00000435919 558 ntBASIC4.47□□□□□ -1.69
CASP4P49662 CACYBPP1-201ENST00000438592 684 ntBASIC4.47□□□□□ -1.69
CASP4P49662 XKRYP6-201ENST00000440468 1116 ntBASIC4.47□□□□□ -1.69
CASP4P49662 XKRYP3-201ENST00000442113 1116 ntBASIC4.47□□□□□ -1.69
CASP4P49662 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.47□□□□□ -1.69
CASP4P49662 AC243772.1-201ENST00000451620 410 ntBASIC4.47□□□□□ -1.69
CASP4P49662 RPL36AP13-201ENST00000457490 317 ntBASIC4.47□□□□□ -1.69
CASP4P49662 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.47□□□□□ -1.69
CASP4P49662 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.47□□□□□ -1.69
CASP4P49662 RPL7AP28-201ENST00000464513 571 ntBASIC4.47□□□□□ -1.69
CASP4P49662 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.47□□□□□ -1.69
CASP4P49662 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
CASP4P49662 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.47□□□□□ -1.69
CASP4P49662 CEACAMP10-202ENST00000495431 496 ntBASIC4.47□□□□□ -1.69
CASP4P49662 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.47□□□□□ -1.69
CASP4P49662 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CASP4P49662 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.47□□□□□ -1.69
CASP4P49662 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.47□□□□□ -1.69
CASP4P49662 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.47□□□□□ -1.69
CASP4P49662 HMGB3P26-201ENST00000560051 582 ntBASIC4.47□□□□□ -1.69
CASP4P49662 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC4.47□□□□□ -1.69
CASP4P49662 AC012417.1-201ENST00000582307 1039 ntBASIC4.47□□□□□ -1.69
CASP4P49662 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.47□□□□□ -1.69
CASP4P49662 AC022387.2-201ENST00000604050 448 ntBASIC4.47□□□□□ -1.69
CASP4P49662 AL590392.1-201ENST00000604960 446 ntBASIC4.47□□□□□ -1.69
CASP4P49662 BNIP3P7-201ENST00000605641 516 ntBASIC4.47□□□□□ -1.69
CASP4P49662 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.47□□□□□ -1.69
CASP4P49662 AP005264.7-201ENST00000625003 745 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms