Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC5.32□□□□□ -1.56
SLC6A4P31645 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
SLC6A4P31645 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
SLC6A4P31645 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.32□□□□□ -1.56
SLC6A4P31645 AC006210.2-201ENST00000367074 1545 ntBASIC5.32□□□□□ -1.56
SLC6A4P31645 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SLC6A4P31645 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SLC6A4P31645 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SLC6A4P31645 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SLC6A4P31645 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
SLC6A4P31645 AC087359.1-201ENST00000508335 1740 ntBASIC5.31□□□□□ -1.56
SLC6A4P31645 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SLC6A4P31645 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SLC6A4P31645 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.31□□□□□ -1.56
SLC6A4P31645 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SLC6A4P31645 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SLC6A4P31645 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SLC6A4P31645 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SLC6A4P31645 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SLC6A4P31645 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SLC6A4P31645 RN7SKP115-201ENST00000363177 317 ntBASIC5.31□□□□□ -1.56
SLC6A4P31645 Y_RNA.194-201ENST00000363985 102 ntBASIC5.31□□□□□ -1.56
SLC6A4P31645 OR1L6-202ENST00000373684 1044 ntBASIC5.31□□□□□ -1.56
SLC6A4P31645 MIR1303-201ENST00000408625 86 ntBASIC5.31□□□□□ -1.56
SLC6A4P31645 RN7SKP114-201ENST00000410327 279 ntBASIC5.31□□□□□ -1.56
SLC6A4P31645 RNA5SP80-201ENST00000410475 111 ntBASIC5.31□□□□□ -1.56
SLC6A4P31645 GPS2P1-201ENST00000411761 986 ntBASIC5.31□□□□□ -1.56
SLC6A4P31645 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.31□□□□□ -1.56
SLC6A4P31645 BLOC1S2P1-201ENST00000428431 301 ntBASIC5.31□□□□□ -1.56
SLC6A4P31645 HSPD1P12-201ENST00000429127 1069 ntBASIC5.31□□□□□ -1.56
SLC6A4P31645 AC010153.1-201ENST00000432862 727 ntBASIC5.31□□□□□ -1.56
SLC6A4P31645 MTCO2P16-201ENST00000436962 677 ntBASIC5.31□□□□□ -1.56
SLC6A4P31645 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.31□□□□□ -1.56
SLC6A4P31645 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.31□□□□□ -1.56
SLC6A4P31645 AL591503.2-201ENST00000442314 1005 ntBASIC5.31□□□□□ -1.56
SLC6A4P31645 RPL34P20-201ENST00000442771 351 ntBASIC5.31□□□□□ -1.56
SLC6A4P31645 CEACAMP7-201ENST00000444105 496 ntBASIC5.31□□□□□ -1.56
SLC6A4P31645 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC5.31□□□□□ -1.56
SLC6A4P31645 ELOCP30-201ENST00000447108 299 ntBASIC5.31□□□□□ -1.56
SLC6A4P31645 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC5.31□□□□□ -1.56
SLC6A4P31645 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.31□□□□□ -1.56
SLC6A4P31645 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.31□□□□□ -1.56
SLC6A4P31645 AC080014.1-201ENST00000496877 1201 ntBASIC5.31□□□□□ -1.56
SLC6A4P31645 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC5.31□□□□□ -1.56
SLC6A4P31645 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.31□□□□□ -1.56
SLC6A4P31645 AC097173.1-201ENST00000505862 819 ntBASIC5.31□□□□□ -1.56
SLC6A4P31645 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC5.31□□□□□ -1.56
SLC6A4P31645 AC021146.8-201ENST00000507455 733 ntBASIC5.31□□□□□ -1.56
SLC6A4P31645 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC5.31□□□□□ -1.56
SLC6A4P31645 MTND3P5-201ENST00000512798 333 ntBASIC5.31□□□□□ -1.56
SLC6A4P31645 RNU6-678P-201ENST00000516832 109 ntBASIC5.31□□□□□ -1.56
SLC6A4P31645 RN7SKP147-201ENST00000517154 244 ntBASIC5.31□□□□□ -1.56
SLC6A4P31645 AC087808.1-201ENST00000520501 361 ntBASIC5.31□□□□□ -1.56
SLC6A4P31645 OR4C2P-201ENST00000530855 1064 ntBASIC5.31□□□□□ -1.56
SLC6A4P31645 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC5.31□□□□□ -1.56
SLC6A4P31645 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.31□□□□□ -1.56
SLC6A4P31645 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.31□□□□□ -1.56
SLC6A4P31645 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.31□□□□□ -1.56
SLC6A4P31645 OR4K7P-201ENST00000580232 945 ntBASIC5.31□□□□□ -1.56
SLC6A4P31645 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.31□□□□□ -1.56
SLC6A4P31645 AL451049.1-201ENST00000608672 497 ntBASIC5.31□□□□□ -1.56
SLC6A4P31645 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.31□□□□□ -1.56
SLC6A4P31645 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC5.31□□□□□ -1.56
SLC6A4P31645 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SLC6A4P31645 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SLC6A4P31645 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.31□□□□□ -1.56
SLC6A4P31645 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SLC6A4P31645 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SLC6A4P31645 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
SLC6A4P31645 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
SLC6A4P31645 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SLC6A4P31645 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
SLC6A4P31645 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SLC6A4P31645 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SLC6A4P31645 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SLC6A4P31645 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.3□□□□□ -1.56
SLC6A4P31645 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SLC6A4P31645 SLC10A5P1-201ENST00000379063 1306 ntBASIC5.3□□□□□ -1.56
SLC6A4P31645 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SLC6A4P31645 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
SLC6A4P31645 THAP12P4-201ENST00000528321 2266 ntBASIC5.3□□□□□ -1.56
SLC6A4P31645 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SLC6A4P31645 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
SLC6A4P31645 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SLC6A4P31645 AL391994.1-201ENST00000254724 282 ntBASIC5.3□□□□□ -1.56
SLC6A4P31645 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SLC6A4P31645 RNA5SP455-201ENST00000365190 119 ntBASIC5.3□□□□□ -1.56
SLC6A4P31645 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
SLC6A4P31645 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SLC6A4P31645 SNORD65.1-201ENST00000390889 71 ntBASIC5.3□□□□□ -1.56
SLC6A4P31645 AL589647.1-201ENST00000402485 466 ntBASIC5.3□□□□□ -1.56
SLC6A4P31645 P2RY10P2-201ENST00000416730 913 ntBASIC5.3□□□□□ -1.56
SLC6A4P31645 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.3□□□□□ -1.56
SLC6A4P31645 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.3□□□□□ -1.56
SLC6A4P31645 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC5.3□□□□□ -1.56
SLC6A4P31645 AC244035.1-201ENST00000430042 390 ntBASIC5.3□□□□□ -1.56
SLC6A4P31645 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.3□□□□□ -1.56
SLC6A4P31645 RPS24P8-201ENST00000431490 402 ntBASIC5.3□□□□□ -1.56
SLC6A4P31645 BX323845.1-201ENST00000432417 179 ntBASIC5.3□□□□□ -1.56
SLC6A4P31645 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms