Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AL109766.1-201ENST00000555080 552 ntBASIC4.88□□□□□ -1.63
HOXC13P31276 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.88□□□□□ -1.63
HOXC13P31276 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.88□□□□□ -1.63
HOXC13P31276 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.88□□□□□ -1.63
HOXC13P31276 AC087477.6-201ENST00000559595 843 ntBASIC4.88□□□□□ -1.63
HOXC13P31276 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.88□□□□□ -1.63
HOXC13P31276 MIR3939-201ENST00000582614 106 ntBASIC4.88□□□□□ -1.63
HOXC13P31276 MIR3936-201ENST00000584304 110 ntBASIC4.88□□□□□ -1.63
HOXC13P31276 RN7SL435P-201ENST00000584418 282 ntBASIC4.88□□□□□ -1.63
HOXC13P31276 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.88□□□□□ -1.63
HOXC13P31276 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.88□□□□□ -1.63
HOXC13P31276 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.88□□□□□ -1.63
HOXC13P31276 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.88□□□□□ -1.63
HOXC13P31276 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.88□□□□□ -1.63
HOXC13P31276 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.88□□□□□ -1.63
HOXC13P31276 AC243756.2-201ENST00000618406 463 ntBASIC4.88□□□□□ -1.63
HOXC13P31276 AC108751.5-201ENST00000492880 1336 ntBASIC4.88□□□□□ -1.63
HOXC13P31276 OR11H5P-202ENST00000641612 1325 ntBASIC4.88□□□□□ -1.63
HOXC13P31276 AC125257.1-201ENST00000560400 2930 ntBASIC4.88□□□□□ -1.63
HOXC13P31276 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HOXC13P31276 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HOXC13P31276 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.88□□□□□ -1.63
HOXC13P31276 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.88□□□□□ -1.63
HOXC13P31276 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
HOXC13P31276 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HOXC13P31276 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.88□□□□□ -1.63
HOXC13P31276 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.88□□□□□ -1.63
HOXC13P31276 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
HOXC13P31276 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.87□□□□□ -1.63
HOXC13P31276 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
HOXC13P31276 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.87□□□□□ -1.63
HOXC13P31276 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HOXC13P31276 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
HOXC13P31276 AC025574.1-201ENST00000554784 1653 ntBASIC4.87□□□□□ -1.63
HOXC13P31276 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
HOXC13P31276 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
HOXC13P31276 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
HOXC13P31276 HNRNPDP2-201ENST00000406475 478 ntBASIC4.87□□□□□ -1.63
HOXC13P31276 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.87□□□□□ -1.63
HOXC13P31276 AC013410.2-201ENST00000422627 201 ntBASIC4.87□□□□□ -1.63
HOXC13P31276 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXC13P31276 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXC13P31276 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXC13P31276 KCTD10P1-201ENST00000434203 625 ntBASIC4.87□□□□□ -1.63
HOXC13P31276 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.87□□□□□ -1.63
HOXC13P31276 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXC13P31276 AC105402.2-201ENST00000438503 358 ntBASIC4.87□□□□□ -1.63
HOXC13P31276 AC108463.1-201ENST00000450258 347 ntBASIC4.87□□□□□ -1.63
HOXC13P31276 RPS20P4-201ENST00000461659 355 ntBASIC4.87□□□□□ -1.63
HOXC13P31276 AC012170.1-201ENST00000495139 359 ntBASIC4.87□□□□□ -1.63
HOXC13P31276 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXC13P31276 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HOXC13P31276 OR8G5-201ENST00000524943 1041 ntBASIC4.87□□□□□ -1.63
HOXC13P31276 AC019227.1-201ENST00000526902 510 ntBASIC4.87□□□□□ -1.63
HOXC13P31276 CYCSP29-201ENST00000533731 318 ntBASIC4.87□□□□□ -1.63
HOXC13P31276 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.87□□□□□ -1.63
HOXC13P31276 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXC13P31276 MIR3160-1-201ENST00000577972 85 ntBASIC4.87□□□□□ -1.63
HOXC13P31276 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXC13P31276 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
HOXC13P31276 AC083899.3-201ENST00000603413 594 ntBASIC4.87□□□□□ -1.63
HOXC13P31276 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.87□□□□□ -1.63
HOXC13P31276 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.87□□□□□ -1.63
HOXC13P31276 AC018618.2-201ENST00000604770 446 ntBASIC4.87□□□□□ -1.63
HOXC13P31276 AL392112.1-201ENST00000605115 829 ntBASIC4.87□□□□□ -1.63
HOXC13P31276 AP001033.2-201ENST00000609701 1003 ntBASIC4.87□□□□□ -1.63
HOXC13P31276 AC006946.3-201ENST00000609791 756 ntBASIC4.87□□□□□ -1.63
HOXC13P31276 AC099669.2-201ENST00000616549 437 ntBASIC4.87□□□□□ -1.63
HOXC13P31276 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.87□□□□□ -1.63
HOXC13P31276 AC020923.1-201ENST00000624021 917 ntBASIC4.87□□□□□ -1.63
HOXC13P31276 AC011815.3-201ENST00000624194 473 ntBASIC4.87□□□□□ -1.63
HOXC13P31276 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.87□□□□□ -1.63
HOXC13P31276 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.87□□□□□ -1.63
HOXC13P31276 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
HOXC13P31276 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.87□□□□□ -1.63
HOXC13P31276 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HOXC13P31276 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HOXC13P31276 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
HOXC13P31276 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
HOXC13P31276 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.86□□□□□ -1.63
HOXC13P31276 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
HOXC13P31276 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HOXC13P31276 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HOXC13P31276 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
HOXC13P31276 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.86□□□□□ -1.63
HOXC13P31276 OR52E6-202ENST00000379946 954 ntBASIC4.86□□□□□ -1.63
HOXC13P31276 RNU1-82P-201ENST00000390851 165 ntBASIC4.86□□□□□ -1.63
HOXC13P31276 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HOXC13P31276 RNA5SP239-201ENST00000410218 129 ntBASIC4.86□□□□□ -1.63
HOXC13P31276 RN7SKP199-201ENST00000410325 305 ntBASIC4.86□□□□□ -1.63
HOXC13P31276 AL591848.1-201ENST00000413092 322 ntBASIC4.86□□□□□ -1.63
HOXC13P31276 AC004022.2-201ENST00000413824 193 ntBASIC4.86□□□□□ -1.63
HOXC13P31276 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.86□□□□□ -1.63
HOXC13P31276 AC073508.1-201ENST00000428866 656 ntBASIC4.86□□□□□ -1.63
HOXC13P31276 DYNLL1P7-201ENST00000429273 258 ntBASIC4.86□□□□□ -1.63
HOXC13P31276 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.86□□□□□ -1.63
HOXC13P31276 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.86□□□□□ -1.63
HOXC13P31276 TPTE2P6-202ENST00000445572 1007 ntBASIC4.86□□□□□ -1.63
HOXC13P31276 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
HOXC13P31276 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms